Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq9016 120 2e-21 >seq9016 Length=252749 Score = 120 bits (132), Expect = 2e-21 Identities = 261/382 (68%), Gaps = 8/382 (2%) Strand=Plus/Minus Query 517258 GGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGAC 517317 ||| | ||| || ||||| |||||||| || | || || |||| | ||||| ||||| Sbjct 235648 GGCTGCCACGTTCAGAATGCCATTGGCGTCGATGTCGAAGCTGACATTGATTTGGGGGAC 235589 Query 517318 CCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTT 517377 |||| | | ||| | |||| || | || | ||| ||||| || || ||| | Sbjct 235588 ACCTCGCGGGGCACGACGGATGCCATGCAGCTCAAAGCGACCCAGGAGGTTGTTGTCTCT 235529 Query 517378 AGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATA 517437 ||| | || ||| |||||| ||| |||||| ||||| ||| || || || | || Sbjct 235528 AGTCATGGCTCTTTCGCCCTCGTAAACTTGGATGGTAACCCCAGGCTGGTTGTCGGCGTA 235469 Query 517438 AGTTGTAAATAC-TCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGG 517496 || | || | |||| |||| || || ||||| || || | | || | ||||| Sbjct 235468 TGTGCTGAAGGCCTCTG-ATTTGGTAGTCGGGATTGTGGTATTGCGAGAGATCAGATTGG 235410 Query 517497 TCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAA 517556 |||||| |||||| |||||||| | || || || || |||||||| || | || || | Sbjct 235409 TCATAACACCACCGGCTGTTTCGATGCCGAGGGAGAGTGGAGTGACGTCGATGAGCACGA 235350 Query 517557 TATT-TTGA-AGTTTTTCATCAGTTTGA-CCAACAAGAATAGCTGCTTGAATAGCAGCAC 517613 || |||| || ||| || ||||| ||| || || ||||| || | ||| |||| Sbjct 235349 GGTTCTTGACAGCTTT--GTC-TTTTGAGCCAGTGAGCATTGCTGCCTGCACAGCTGCAC 235293 Query 517614 CATATGCAACAGCTTCATCAGG 517635 | || || ||||| |||||||| Sbjct 235292 CGTACGCCACAGCCTCATCAGG 235271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779790086614918