Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq18747 132 1e-25 seq3888 125 2e-23 seq9036 120 7e-22 >seq18747 Length=106157 Score = 132 bits (146), Expect = 1e-25 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || || | |||||| |||||||| || || || ||||| ||| || || Sbjct 22512 TCTCAGACGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 22453 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| || ||||| || || ||||| | || || || ||||| |||||||| Sbjct 22452 GCGACCATCTTCCAGTTGCTTGCCGGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCC 22393 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| || || || ||| || |||||||||||||| || ||||| ||||| Sbjct 22392 TTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACCTCAAG 22333 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| | ||||| || || | || || ||||| | |||||| Sbjct 22332 GGTGATTGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATT 22290 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | || || | |||||| |||||||| || || || ||||| ||| || || Sbjct 23424 TCTCAGACGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 23365 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| || ||||| || || ||||| | || || || ||||| |||||||| Sbjct 23364 GCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCC 23305 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| || || || |||||| |||||||||||||| || || || ||||| Sbjct 23304 TTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAG 23245 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || | || || || || | ||||| Sbjct 23244 GGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 23203 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| ||||||||||| || || ||||| ||| || || | |||||||| || || Sbjct 22950 GTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCAGTTG 22891 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | || ||| || ||||| ||||||||||| ||||| || || || Sbjct 22890 CTTGCCAGCAAAGATCAATCTTTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 22831 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || |||||||||||||| || || || |||||||||| ||||| || || Sbjct 22830 GGCTTTCACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 22771 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 22770 GAGGGTCTTGACAAAGATCTGCAT 22747 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || ||||| ||| || || | |||||||| || || Sbjct 23178 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCCAGTTG 23119 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | || || || ||||| ||||||||||| ||||| || || || Sbjct 23118 CTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 23059 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || ||||||||||||||||| || || |||||||||| ||||| || || Sbjct 23058 GGCTTTCACATTCTCAATGGTGTCCGAGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 22999 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 22998 GAGGGTCTTGACAAAGATCTGCAT 22975 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| ||||||||||| || || ||||| || || || | |||||||| || || Sbjct 22722 GTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCACTCAGGGTGCGGCCATCTTCCAGTTG 22663 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | || || || ||||| || |||||||| ||||| || || || Sbjct 22662 CTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTGGATCTT 22603 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| |||||||||||||| || || || |||||||||| ||||| || || Sbjct 22602 AGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 22543 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 22542 GAGGGTCTTGACAAAGATCTGCAT 22519 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || ||||| || || || | |||||||| || || Sbjct 23862 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCATCTTCCAGTTG 23803 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | || || || ||||| ||||||||||| ||||| || || || Sbjct 23802 CTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 23743 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || ||||||||||||||||| || || |||||||||| ||||| || || Sbjct 23742 GGCTTTCACATTCTCAATGGTGTCCGAGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 23683 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 23682 GAGGGTCTTGACAAAGATCTGCAT 23659 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| ||||||||||| || || ||||| || || || | |||||||| || || Sbjct 24090 GTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCACTCAGGGTGCGGCCATCTTCCAGTTG 24031 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | || || || ||||| ||||||||||| ||||| || || || Sbjct 24030 CTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 23971 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || |||||||||||||| || || || |||||||||| ||||| || || Sbjct 23970 GGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 23911 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 23910 GAGGGTCTTGACAAAGATCTGCAT 23887 Score = 116 bits (128), Expect = 8e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || ||||| || || || | |||||||| || || Sbjct 23634 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCATCTTCCAGTTG 23575 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | || || || ||||| ||||||||||| ||||| || || || Sbjct 23574 CTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 23515 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || |||||||||||||| || || || |||||||||| ||||| || || Sbjct 23514 GGCTTTCACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 23455 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 23454 GAGGGTCTTGACAAAGATCTGCAT 23431 Score = 116 bits (128), Expect = 8e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || ||||| || || || | |||||||| || || Sbjct 24318 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCATCTTCCAGTTG 24259 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | || || || ||||| ||||||||||| ||||| || || || Sbjct 24258 CTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 24199 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || |||||||||||||| || || || |||||||||| ||||| || || Sbjct 24198 GGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 24139 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 24138 GAGGGTCTTGACAAAGATCTGCAT 24115 >seq3888 Length=367485 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | ||| || | |||||| |||||||| || || || ||||| ||| || || Sbjct 211484 TCTCAGACGCAACACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 211425 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| || ||||| || || ||||| | || || || ||||| || ||||| Sbjct 211424 GCGACCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCC 211365 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| || || || ||| || |||||||||||||| || ||||| ||||| Sbjct 211364 TTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACCTCAAG 211305 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| || || | || || || || | ||||| Sbjct 211304 GGTGATGGTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCAT 211263 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | ||| || | |||||| |||||||| || || || ||||| ||| || || Sbjct 211712 TCTCAGACGCAACACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGT 211653 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| || ||||| || || ||||| | || || || ||||| || ||||| Sbjct 211652 GCGACCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCC 211593 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| || || || ||| || |||||||||||||| || ||||| ||||| Sbjct 211592 TTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACCTCAAG 211533 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | ||||| || || | || || || || | ||||| Sbjct 211532 GGTGATGGTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCAT 211491 >seq9036 Length=11236 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || ||||| ||| || || | |||||||| || || Sbjct 10550 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCAGTTG 10609 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | || || || ||||| ||||||||||| ||||| || || || Sbjct 10610 CTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 10669 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || |||||||||||||| || || || |||||||||| ||||| || || Sbjct 10670 GGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 10729 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 10730 GAGGGTCTTGACAAAGATCTGCAT 10753 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || ||||| ||| || || | |||||||| || || Sbjct 10778 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCAGTTG 10837 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | || || || ||||| ||||||||||| ||||| || || || Sbjct 10838 CTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 10897 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || |||||||||||||| || || || |||||||||| ||||| || || Sbjct 10898 GGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 10957 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 10958 GAGGGTCTTGACAAAGATCTGCAT 10981 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || || || ||||| ||| || || | |||||||| || || Sbjct 11006 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCAGTTG 11065 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | || || || ||||| ||||||||||| ||||| || || || Sbjct 11066 CTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 11125 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || |||||||||||||| || || || |||||||||| ||||| || || Sbjct 11126 GGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGTCTTGCCAGT 11185 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 11186 GAGGGTCTTGACAAAGATCTGCAT 11209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109185880507901