Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25]
20,803 sequences; 333,283,208 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq2620 102 9e-17
>seq2620
Length=811290
Score = 102 bits (112), Expect = 9e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042
|||| ||||| || ||||| || ||| || || | ||||||||||| || | || |
Sbjct 743877 CCTCATCTCTGCTGATCAACTCGTTACTGAACGTGAGACCAGGCATCACGCCACGCTTCT 743936
Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102
| |||||||| || | ||||| || ||||| || || ||||| || || || ||||| |
Sbjct 743937 TCAACCAGAAGATGGCTGCAAAAGACCCAGAGAAAAAAATACCCTCCACAGCAGCAAATG 743996
Query 19103 CAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAG 19162
| || | | || | ||||| | | || || ||||| || |||||||||||
Sbjct 743997 CGACCACACGCTCAGCGTAACTGCTCTGAGAATCATTGATCCAACGCAATGCCCAATCAG 744056
Query 19163 CCTTCTTTTTTACACATGGCATTGTCTCTAT 19193
| |||| || ||||| ||||| ||||| ||
Sbjct 744057 CTTTCTCCTTAACACAGGGCATCGTCTCGAT 744087
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 19350 ATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATG 19409
|||||||||||| |||||||| || || || ||||| || | ||||| ||| || ||
Sbjct 744367 ATTTTCATTAACAATTCCATCGCTGGCAGCGAAAAAAGCCAGAACATGAGAAATGAAGTG 744426
Query 19410 TTTTTCATCTGAGGTTAATGT-ATTCCAATCATTAATATCTTTAGATAAATCTACTTCTT 19468
|| |||| | || | | | ||| | | || ||||| || | || || || |
Sbjct 744427 ACGCTCGTCTG-GTTTCAGCTGCTCCCAGTGAGAAACGTCTTTTGAGAGGTCGACCTCCT 744485
Query 19469 CAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTA 19528
| | ||||| ||||| || || |||||||| ||||| | ||| || ||| | |||||||
Sbjct 744486 CTGCCGTCCAGAAAGACGCTTCAGCTTTTTTGTACATTTGCCAGATGTCATGGTATTGTA 744545
Query 19529 TAGGAAATATAACAAATC 19546
| || || || || ||||
Sbjct 744546 TTGGGAAAATGACGAATC 744563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561962630632920
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |