Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq1283 109 2e-19 >seq1283 Length=34873 Score = 109 bits (120), Expect = 2e-19 Identities = 204/299 (68%), Gaps = 3/299 (1%) Strand=Plus/Minus Query 25975 ACCACAATTTCAGTGGTGTAGCGCTCAACGCCGTCCTTTTCC---CACTTGCGGGTTTTC 26031 ||||| | ||||||||||| || || ||||| || ||| ||||| ||||| | Sbjct 30966 ACCACGACCTCAGTGGTGTATCGGTCCTGACCGTCTTTATCCTGCCACTTTCGGGTCTGG 30907 Query 26032 AGTTGCCCCTCAATGTAAACCTGTGAACCTTTCTTCAGGTACTCGCCCGCGATCTCCGCT 26091 || | || || || ||||||| || ||||| || ||||||| || |||||||| Sbjct 30906 AGCTTGCCTTCGATATAAACCTTGGAGCCTTTATTGAGGTACTGCTGGGCAATCTCCGCC 30847 Query 26092 ACCTTGCCAAACAGCACGACGCGATGCCATTCTGTCACTTCTTTCTTTTCGCCGGTCTGC 26151 | ||| || || | ||| || ||||||||||| ||| ||| | || | |||||| | | Sbjct 30846 AGCTTCCCGAAGATCACCACCCGATGCCATTCGGTCTTTTCCTGCTGCTGGCCGGTGTTC 30787 Query 26152 TTATCGTTCCAGCTTTCTGAGGTCGCTACGGTAATGTTGGCGACTGCGCCGCCATTAGGC 26211 ||||| ||||| || ||| || | | | ||||| || || | || | | | Sbjct 30786 TTATCCTTCCATGCCTCACTGGTGGCCAGTGAGAGATTGGCCACGGCTGCACCCTGACCC 30727 Query 26212 ATGTAACGGATCTCTGGATCGTTCCCCAGGTTACCGACAAGGATTACTTTATTTACGCC 26270 | | || | || ||||||| |||||||| |||| || |||||||| || | ||| Sbjct 30726 GTAAACCGAACATCCGGATCGTCGCCCAGGTTGCCGATTAGAATTACTTTGTTGATGCC 30668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159778119359298