Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq18747 123 2e-23 seq9036 123 2e-23 >seq18747 Length=106157 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || || | || || |||||||| || || || || || ||||| ||| Sbjct 23201 CCTCCTCTCAAGCGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 23142 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| |||| |||||| || ||||| ||||| | ||| ||||| || ||| Sbjct 23141 AGGGTGCGGCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGA 23082 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || ||| ||| | || | ||||| || | || || Sbjct 23081 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGGCTCAACC 23022 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || | || ||||| || | || || ||||| ||||||||| Sbjct 23021 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 22974 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || || | || || |||||||| || ||||| || || ||||| || Sbjct 24113 CCTCCTCTCAAGCGCAGCACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCACTC 24054 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | |||| |||| |||||| || ||||| ||||| | ||| ||||| || ||| Sbjct 24053 AGGGTGCGGCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGA 23994 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || ||| ||| | || | ||||| || | || || Sbjct 23993 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACC 23934 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || | || ||||| || | || || ||||| ||||||||| Sbjct 23933 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 23886 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | ||| | || || |||||||| || || || || || ||||| ||| Sbjct 22517 CCTCCTCTCAGACGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 22458 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| |||||| || ||||| ||||| | ||| ||||| || ||| Sbjct 22457 AGGGTGCGACCATCTTCCAGTTGCTTGCCGGCAAAGATCAATCTCTGCTGATCTGGGGGA 22398 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || ||| | || | ||||| || | ||||| Sbjct 22397 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACC 22338 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| |||| || |||||||| | || || || || |||||||| Sbjct 22337 TCAAGGGTGATTGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 22291 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || || | || || |||||||| || ||||| || || ||||| ||| Sbjct 22973 CCTCCTCTCAAGCGCAGCACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTC 22914 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| |||||| || ||||| ||||| | || ||||| || ||| Sbjct 22913 AGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCTGGGGGA 22854 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || ||| ||| | || | ||||| || | || || Sbjct 22853 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGGGCTCAACC 22794 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || | || ||||| || | || || ||||| ||||||||| Sbjct 22793 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 22746 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| | ||| | || || |||||||| || || || || || ||||| ||| Sbjct 23429 CCTCCTCTCAGACGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 23370 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| |||||| || ||||| ||||| | ||| ||||| || ||| Sbjct 23369 AGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGA 23310 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || ||| | || | ||||| || | || || Sbjct 23309 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCTGAGGGCTCAACC 23250 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || | || ||||| || | || || ||||| ||||||||| Sbjct 23249 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 23202 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || || | || || |||||||| || || || || || ||||| || Sbjct 23657 CCTCCTCTCAAGCGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTC 23598 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| |||||| || ||||| ||||| | ||| ||||| || ||| Sbjct 23597 AGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGA 23538 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || ||| ||| | || | ||||| || | || || Sbjct 23537 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGGGCTCAACC 23478 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || | || ||||| || | || || ||||| ||||||||| Sbjct 23477 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 23430 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || || | || || |||||||| || || || || || ||||| || Sbjct 23885 CCTCCTCTCAAGCGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTC 23826 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| |||||| || ||||| ||||| | ||| ||||| || ||| Sbjct 23825 AGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGA 23766 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || ||| ||| | || | ||||| || | || || Sbjct 23765 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGGCTCAACC 23706 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || | || ||||| || | || || ||||| ||||||||| Sbjct 23705 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 23658 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| ||||| | || || |||||||| || || || || || ||||| || Sbjct 24341 CCGCCTCTCAAACGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTC 24282 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| |||||| || ||||| ||||| | ||| ||||| || ||| Sbjct 24281 AGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGA 24222 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || ||| ||| | || | ||||| || | || || Sbjct 24221 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACC 24162 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || | || ||||| || | || || ||||| ||||||||| Sbjct 24161 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 24114 >seq9036 Length=11236 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| ||||| | || || |||||||| || || || || || ||||| ||| Sbjct 10527 CCTCCTCTCAAACGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 10586 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| |||||| || ||||| ||||| | ||| ||||| || ||| Sbjct 10587 AGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGA 10646 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || ||| ||| | || | ||||| || | || || Sbjct 10647 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACC 10706 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || | || ||||| || | || || ||||| ||||||||| Sbjct 10707 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 10754 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || || | || || |||||||| || || || || || ||||| ||| Sbjct 10755 CCTCCTCTCAAGCGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 10814 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| |||||| || ||||| ||||| | ||| ||||| || ||| Sbjct 10815 AGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGA 10874 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || ||| ||| | || | ||||| || | || || Sbjct 10875 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACC 10934 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || | || ||||| || | || || ||||| ||||||||| Sbjct 10935 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 10982 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || || | || || |||||||| || || || || || ||||| ||| Sbjct 10983 CCTCCTCTCAAGCGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 11042 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| |||||| || ||||| ||||| | ||| ||||| || ||| Sbjct 11043 AGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGA 11102 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || ||| ||| | || | ||||| || | || || Sbjct 11103 ATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACC 11162 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| || | || ||||| || | || || ||||| ||||||||| Sbjct 11163 TCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATG 11210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396177928936671