Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq14018 80.6 6e-11 >seq14018 Length=1105 Score = 80.6 bits (88), Expect = 6e-11 Identities = 132/188 (70%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 1451 CAGCATCTTCAAGATGTTCTGGTGCGAAATGGGCATAGACCATTGTCATTTTTATATCTG 1510 ||||||||| | ||| || || | || | || || ||| ||||| ||||| | Sbjct 189 CAGCATCTTTTAAATGCTCAGGATCAAACTTTGCGTACCTCATGGTCATGGCAATATCAG 130 Query 1511 AGTGCCCTAAAATATCTCTCAATACAAGAATATTTCCGCCATTCATCATAAAGTGACTAG 1570 | || || | || | | || ||| ||||| || |||||||||||||||||||| || | Sbjct 129 AATGACCGAGTATTTTTTGCAGTACCAGAATGTTGCCGCCATTCATCATAAAGTGGCTGG 70 Query 1571 CGAATGTATGGCGCAATACAT-GCGTGCACTGGCCCTCTGGCAAGTCAATACCTGCTCTT 1629 | || ||||| || ||||| | || ||| ||| || | || || | ||||||| | | Sbjct 69 CAAAGGTATGCCGTAATACGTGGCTTGC-CTGTCCTTTGGGTAAATGGATACCTGAGCGT 11 Query 1630 TTTACTGC 1637 |||| ||| Sbjct 10 TTTAATGC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109025860073394