Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq18747 96.9 2e-14 seq9036 91.5 1e-12 >seq18747 Length=106157 Score = 96.9 bits (106), Expect = 2e-14 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || | | ||| ||||| || ||||| |||||||| Sbjct 22902 ATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCTGGGGGAATGCCTTCCTT 22843 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| ||| ||| ||||| || || | | | | ||||||||||| Sbjct 22842 GTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAAT 22783 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| || || || || Sbjct 22782 GGTCTTGCCAGTGAGGGTCTTGACAAAGATCTG 22750 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || | | || ||||| || || || |||||||| Sbjct 22674 ATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCTTCCTT 22615 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| ||||||| ||||| || || | | | | ||||||||||| Sbjct 22614 GTCCTGGATCTTAGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAAT 22555 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| || || || || Sbjct 22554 GGTCTTGCCAGTGAGGGTCTTGACAAAGATCTG 22522 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || | | || ||||| || ||||| |||||||| Sbjct 23130 ATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTT 23071 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| ||| ||| ||||| || || | | | | ||||||||||| Sbjct 23070 GTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGGCTCAACCTCAAGGGTAAT 23011 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| || || || || Sbjct 23010 GGTCTTGCCAGTGAGGGTCTTGACAAAGATCTG 22978 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || | | || ||||| || ||||| |||||||| Sbjct 23358 ATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTT 23299 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| |||||| ||||| || || | | | | ||||||||||| Sbjct 23298 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAAT 23239 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| || || || || Sbjct 23238 GGTCTTGCCAGTGAGGGTCTTGACAAAGATCTG 23206 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || | | || ||||| || ||||| |||||||| Sbjct 23586 ATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTT 23527 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| ||| ||| ||||| || || | | | | ||||||||||| Sbjct 23526 GTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAAT 23467 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| || || || || Sbjct 23466 GGTCTTGCCAGTGAGGGTCTTGACAAAGATCTG 23434 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || | | || ||||| || ||||| |||||||| Sbjct 23814 ATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTT 23755 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| ||| ||| ||||| || || | | | | ||||||||||| Sbjct 23754 GTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGGCTCAACCTCAAGGGTAAT 23695 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| || || || || Sbjct 23694 GGTCTTGCCAGTGAGGGTCTTGACAAAGATCTG 23662 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || | | || ||||| || ||||| |||||||| Sbjct 24042 ATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTT 23983 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| ||| ||| ||||| || || | | | | ||||||||||| Sbjct 23982 GTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAAT 23923 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| || || || || Sbjct 23922 GGTCTTGCCAGTGAGGGTCTTGACAAAGATCTG 23890 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || | | || ||||| || ||||| |||||||| Sbjct 24270 ATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTT 24211 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| ||| ||| ||||| || || | | | | ||||||||||| Sbjct 24210 GTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAAT 24151 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| || || || || Sbjct 24150 GGTCTTGCCAGTGAGGGTCTTGACAAAGATCTG 24118 >seq9036 Length=11236 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || | | || ||||| || ||||| |||||||| Sbjct 10598 ATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTT 10657 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| ||| ||| ||||| || || | | | | ||||||||||| Sbjct 10658 GTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAAT 10717 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| || || || || Sbjct 10718 GGTCTTGCCAGTGAGGGTCTTGACAAAGATCTG 10750 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || | | || ||||| || ||||| |||||||| Sbjct 10826 ATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTT 10885 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| ||| ||| ||||| || || | | | | ||||||||||| Sbjct 10886 GTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAAT 10945 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| || || || || Sbjct 10946 GGTCTTGCCAGTGAGGGTCTTGACAAAGATCTG 10978 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| |||||||| || | | || ||||| || ||||| |||||||| Sbjct 11054 ATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTT 11113 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| ||| ||| ||||| || || | | | | ||||||||||| Sbjct 11114 GTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAAT 11173 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| || || || || Sbjct 11174 GGTCTTGCCAGTGAGGGTCTTGACAAAGATCTG 11206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267286858393844