Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq20156 87.8 9e-13 >seq20156 Length=513389 Score = 87.8 bits (96), Expect = 9e-13 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 |||||| | || ||||||||| || ||| || | ||| |||||||| | || || || Sbjct 226728 CCAATCTCCGTTCTGCTCAACTCGCTTCATGAACAGATCAGGAATCCAAAGGGCGTAGAA 226669 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 | ||| ||||||||| ||| || || ||| ||||| ||| | ||||||||| Sbjct 226668 CAGATCCCTCGCTCTCTGTTCCTCCTTGCCGGTGTTCTTGCGACAATCGAGGAAATCAAA 226609 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAA 26061 || |||| ||||||||| || | ||||| ||||| Sbjct 226608 AACGTCTGCGTGCCATGGCTCCAGGTAGATGGCAAA 226573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252975845108225