Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq18747 100 6e-16 seq3888 100 6e-16 seq9036 89.7 1e-12 >seq18747 Length=106157 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || ||||| | || | || || || | || | |||||| ||| || || ||| Sbjct 22748 ATGCCTCCTCTCAAGCGCAGCACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCA 22689 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || |||| |||| ||| || ||||||||||| |||||||| ||||| || Sbjct 22688 CTCAGGGTGCGGCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGG 22629 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || ||| ||| ||||| || | ||||| | || Sbjct 22628 GGGATGCCTTCCTTGTCCTGGATCTTAGCTTTGACATTCTCAATGGTGTCTGAGGGCTCA 22569 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || |||||||| || ||||| | || || | ||| |||||||| Sbjct 22568 ACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 22519 Score = 95.1 bits (104), Expect = 2e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||| ||| || ||||||||||| |||||||| ||||| || || || ||||| | Sbjct 23587 CATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCT 23528 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | || || || || ||| ||||| || | ||||| | || || || || |||| Sbjct 23527 TGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAA 23468 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| || ||||| | || || | ||| |||||||| Sbjct 23467 TGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 23431 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || ||||| ||||| | || || || | || | ||| || ||| || || || Sbjct 23432 ATGCCTCCTCTCAGACGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 23373 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || |||| |||| ||| || ||||||||||| |||||||| ||||| || Sbjct 23372 CTCAGGGTGCGACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGG 23313 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || || || ||||| || | ||||| | || Sbjct 23312 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCTGAGGGCTCA 23253 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || |||||||| || ||||| | || || | ||| |||||||| Sbjct 23252 ACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 23203 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || ||||| | || | || || || | || | |||||| ||| || || ||| Sbjct 24116 ATGCCTCCTCTCAAGCGCAGCACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCA 24057 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || |||| |||| ||| || ||||||||||| |||||||| ||||| || Sbjct 24056 CTCAGGGTGCGGCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGG 23997 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || || ||| ||||| || | || || | || Sbjct 23996 GGAATGCCTTCCTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCA 23937 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || |||||||| || ||||| | || || | ||| |||||||| Sbjct 23936 ACCTCAAGGGTAATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 23887 Score = 89.7 bits (98), Expect = 1e-12 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||| ||| || ||||||||||| ||||| || ||||| || || || ||||| | Sbjct 22903 CATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCTGGGGGAATGCCTTCCT 22844 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | || || || || ||| ||||| || | ||||| | || || || || |||| Sbjct 22843 TGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAA 22784 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| || ||||| | || || | ||| |||||||| Sbjct 22783 TGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 22747 Score = 89.7 bits (98), Expect = 1e-12 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||| ||| || ||||||||||| |||||||| ||||| || || || ||||| | Sbjct 23131 CATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCT 23072 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | || || || || ||| ||||| || | || || | || || || || |||| Sbjct 23071 TGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGGCTCAACCTCAAGGGTAA 23012 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| || ||||| | || || | ||| |||||||| Sbjct 23011 TGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 22975 Score = 89.7 bits (98), Expect = 1e-12 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||| ||| || ||||||||||| |||||||| ||||| || || || ||||| | Sbjct 23815 CATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCT 23756 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | || || || || ||| ||||| || | || || | || || || || |||| Sbjct 23755 TGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGGCTCAACCTCAAGGGTAA 23696 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| || ||||| | || || | ||| |||||||| Sbjct 23695 TGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 23659 Score = 89.7 bits (98), Expect = 1e-12 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||| ||| || ||||||||||| |||||||| ||||| || || || ||||| | Sbjct 24271 CATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCT 24212 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | || || || || ||| ||||| || | || || | || || || || |||| Sbjct 24211 TGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAA 24152 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| || ||||| | || || | ||| |||||||| Sbjct 24151 TGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 24115 >seq3888 Length=367485 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| ||||| || || || || | || | ||| || ||| || || || Sbjct 211492 ATGCCACCTCTCAGACGCAACACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 211433 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || |||| |||| ||| || ||||||||||| |||||||| ||||| || Sbjct 211432 CTCAGGGTGCGACCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGG 211373 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || || || ||||| || | ||||| | || Sbjct 211372 GGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCC 211313 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || ||||||| || || | ||| |||||||| Sbjct 211312 ACCTCAAGGGTGATGGTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCAT 211263 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| ||||| || || || || | || | ||| || ||| || || || Sbjct 211720 ATGCCACCTCTCAGACGCAACACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 211661 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || |||| |||| ||| || ||||||||||| |||||||| ||||| || Sbjct 211660 CTCAGGGTGCGACCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGG 211601 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || || || ||||| || | ||||| | || Sbjct 211600 GGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCC 211541 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || ||||| || ||||||| || || | ||| |||||||| Sbjct 211540 ACCTCAAGGGTGATGGTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCAT 211491 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 || ||||| ||||| || || || || | || | ||| || ||| || || || Sbjct 211945 CCCCCTCTCAGACGCAACACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 211886 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | || || |||| |||| ||| || ||||||||||| |||||||| ||||| || || Sbjct 211885 AGGGTGCGACCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGG 211826 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || ||||| || || || || || || ||||| ||| | ||||| | || || Sbjct 211825 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCTATGGTGTCTGAGGGCTCCACC 211766 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || ||||| || ||||||| || || | ||| |||||||| Sbjct 211765 TCAAGGGTGATGGTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCAT 211719 >seq9036 Length=11236 Score = 89.7 bits (98), Expect = 1e-12 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||| ||| || ||||||||||| |||||||| ||||| || || || ||||| | Sbjct 10597 CATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCT 10656 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | || || || || ||| ||||| || | || || | || || || || |||| Sbjct 10657 TGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAA 10716 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| || ||||| | || || | ||| |||||||| Sbjct 10717 TGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 10753 Score = 89.7 bits (98), Expect = 1e-12 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||| ||| || ||||||||||| |||||||| ||||| || || || ||||| | Sbjct 10825 CATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCT 10884 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | || || || || ||| ||||| || | || || | || || || || |||| Sbjct 10885 TGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAA 10944 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| || ||||| | || || | ||| |||||||| Sbjct 10945 TGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 10981 Score = 89.7 bits (98), Expect = 1e-12 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||| ||| || ||||||||||| |||||||| ||||| || || || ||||| | Sbjct 11053 CATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCT 11112 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | || || || || ||| ||||| || | || || | || || || || |||| Sbjct 11113 TGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAA 11172 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 |||| || ||||| | || || | ||| |||||||| Sbjct 11173 TGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 11209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984217598239050