Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2264 109 2e-18 >seq2264 Length=368245 Score = 109 bits (120), Expect = 2e-18 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 302584 TTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGA 302643 || || ||||||||||| || || ||||| | |||||| |||||||||||||| || Sbjct 288781 TTCATCAAACGACGCTGGATGTATCCAGTCTCGGCTGTTTTGACAGCTGTATCAATGAGG 288840 Query 302644 CCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAG 302703 || | | || ||||| || ||||| || | |||| || | || | | | Sbjct 288841 CCCTCTCTCCCTCCCATGGCGTGGAAAAAGAACTCTGTGGGAGTCAAACCGGCCAGGTAC 288900 Query 302704 GAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGG 302763 || ||||||| |||||||||| ||| || || ||| |||| | || |||||||| Sbjct 288901 GAATTCTCAACAAAACCACGCGACTCAGGACCATAATCGTCCTTGATGAAATGTGGCAGA 288960 Query 302764 GTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCA 302818 || | | | ||||| |||||||||| || || || ||||||||||| |||| Sbjct 288961 GTGCGATGCCTGAAGCCGAATGGGATACGTTTACCCTCCACGTTCTGCTGACCCA 289015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471425304036611