Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq1283 87.8 5e-13 >seq1283 Length=34873 Score = 87.8 bits (96), Expect = 5e-13 Identities = 198/298 (66%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 33176 GAGGAATCAACAAAGTAATCATTTTGGGCACTCTCGGACAAGACCCGGAAGTTAAATATA 33235 |||| |||||||||||||| | | |||| || || | || ||||| ||| | || Sbjct 30666 GAGGCATCAACAAAGTAATTCTAATCGGCAACCTGGGCGACGATCCGGATGTTCGGTTTA 30725 Query 33236 TGCCTTCTGGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGAGCAGTGGAACGATA 33295 | | || | || ||| |||||| || ||||| || ||| ||||| |||| Sbjct 30726 CGGGTCAGGGTGCAGCCGTGGCCAATCTCTCACTGGCCACCAGTGAGGCATGGAAGGATA 30785 Query 33296 AAGCAACAGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGGAAAGC 33355 | || || | || | || |||| ||||||||||| ||||| |||||||| |||| Sbjct 30786 AGAACACCGGCCAGCAGCAGGAAAAGACCGAATGGCATCGGGTGGTGATCTTCGGGAAGC 30845 Query 33356 TGGCAGAGGTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATGTAGAAGGAAAAT 33415 |||| ||| | || | ||||| |||||||| |||| ||| | ||||| || Sbjct 30846 TGGCGGAGATTGCCCAGCAGTACCTCAATAAAGGCTCCAAGGTTTATATCGAAGGCAAGC 30905 Query 33416 TACGTACTCGCAAATGGACAGATCAAAGCGGTGTTGAAAAATACACTACTGAAATCGT 33473 | | || || || ||| ||| || |||| || |||||| ||||| |||| Sbjct 30906 TCCAGACCCGAAAGTGGCAGGATAAAGACGGTCAGGACCGATACACCACTGAGGTCGT 30963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152007239517804