Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_021857.1 Length=41475 Score E Sequences producing significant alignments: (Bits) Value seq1283 120 8e-23 >seq1283 Length=34873 Score = 120 bits (132), Expect = 8e-23 Identities = 260/383 (68%), Gaps = 21/383 (5%) Strand=Plus/Plus Query 632 TACCCCAACGTAAATGCTGCCAATCAGTATGCCCGTGATGTCGTGCGCGGAAAGATTGTG 691 |||||||| || ||| | ||||||| ||||| || ||||| || |||| || || | Sbjct 498 TACCCCAATGTTAATTCGGCCAATCGTTATGCGCGGGATGTAGTCAGCGGCAAAATCATT 557 Query 692 GCCTGCCAGTTTGTGATTCAGGCCTGCCAGCGCCATCTTGATGACCTG----ATGGCGGA 747 ||||||| | ||| | ||| || || || || || ||||| ||| || | | Sbjct 558 GCCTGCCGTTATGTTCGCCTGGCTTGTCAACGTCACCTGGATGATCTGGGAAATTCCAAA 617 Query 748 AAAAAGTAAGTCGTTTCGTTACCGCTTCGACAAAGACCTGGCTGAACGGGCCGCGAAATT 807 |||||| | | | ||||| ||||| | |||| |||||||| ||| ||||| Sbjct 618 AAAAAGGATTAC----CCCTACCGATTCGATAGAGACAAAGCTGAACGAGCCTGTAAATT 673 Query 808 TATTCAGCTGTTGCCACACACCAAGGGGGAGTGGGCATTCAAACG-------GA--TGCC 858 ||||||||| | || || ||||| || ||||||||| || || || || Sbjct 674 TATTCAGCTTCTCCCCCATACCAAAGGAGAGTGGGCAAGAAAGCGCGGGCCTGAAGGGCT 733 Query 859 CATCACGCTGGAGCCGTGGCAGCTCTTTGTGATCTGCTGC-GCGTTTGGCTGGGTCAATA 917 || |||||||| ||||| | ||| | |||| | || | |||||||||||| || Sbjct 734 AATAACGCTGGAAAGCTGGCAACGGTTTATTATCT-CGGCGGTGTTTGGCTGGGTTTTTA 792 Query 918 AAGGCTCCCGGC-TGCGCCGCTTCCGTGAGGTGTATACCGAAATCCCCCGTAAGAACGGC 976 || | | ||| | || || ||| |||| || |||| |||||| | || || || || Sbjct 793 AA-TCAACGGGCTTACGTCGTTTCAGTGAAGTTTATAACGAAATTTCACGGAAAAATGGT 851 Query 977 AAATCGGCAATCTCTGCCGGTGT 999 ||||| ||||| |||| ||||| Sbjct 852 AAATCCGCAATAACTGCGGGTGT 874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132565643471382