Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq1283 118 3e-22 >seq1283 Length=34873 Score = 118 bits (130), Expect = 3e-22 Identities = 259/385 (67%), Gaps = 21/385 (5%) Strand=Plus/Plus Query 574 TACCCCAACGTAAATGCTGCAAATCAGTATGCCCGGGATGTCGTGCGCGGAAAGATTGTT 633 |||||||| || ||| | || |||| ||||| |||||||| || |||| || || || Sbjct 498 TACCCCAATGTTAATTCGGCCAATCGTTATGCGCGGGATGTAGTCAGCGGCAAAATCATT 557 Query 634 GCCTGCCAGTTTGTGATTCAGGCCTGCCAGCGCCATCTTGATGACCTG----ATGGCGGA 689 ||||||| | ||| | ||| || || || || || ||||| ||| || | | Sbjct 558 GCCTGCCGTTATGTTCGCCTGGCTTGTCAACGTCACCTGGATGATCTGGGAAATTCCAAA 617 Query 690 AAAAAGTAAGTCGTTTCGTTACCGCTTCGACAAGGACCTGGCTGAACGGGCCGCGAAATT 749 |||||| | | | ||||| ||||| | ||| |||||||| ||| ||||| Sbjct 618 AAAAAGGATTAC----CCCTACCGATTCGATAGAGACAAAGCTGAACGAGCCTGTAAATT 673 Query 750 TATTCAGCTGTTGCCGCACACCAAGGGGGAGTGGGCATTCAAACG-------GA--TGCC 800 ||||||||| | || || ||||| || ||||||||| || || || || Sbjct 674 TATTCAGCTTCTCCCCCATACCAAAGGAGAGTGGGCAAGAAAGCGCGGGCCTGAAGGGCT 733 Query 801 CATCACGCTGGAGCCGTGGCAGCTATTTGTGATCT--GCTGTGCGTTTGGCTGGGTCAAT 858 || |||||||| ||||| | ||| | |||| || || |||||||||||| | Sbjct 734 AATAACGCTGGAAAGCTGGCAACGGTTTATTATCTCGGCGGT--GTTTGGCTGGGTTTTT 791 Query 859 AAAGGCACCCGGTTGCGCCGCTTCCGGGAGGTGTACACCGAAATCCCCCGTAAGAACGGC 918 ||| || | || || || ||| | || || || | |||||| | || || || || Sbjct 792 AAATCAACGGGCTTACGTCGTTTCAGTGAAGTTTATAACGAAATTTCACGGAAAAATGGT 851 Query 919 AAATCAGCAATCTCTGCCGGTGTTG 943 ||||| ||||| |||| ||||||| Sbjct 852 AAATCCGCAATAACTGCGGGTGTTG 876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127072600783920