Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq1283 152 1e-32 seq11123 143 8e-30 >seq1283 Length=34873 Score = 152 bits (168), Expect = 1e-32 Identities = 219/306 (72%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 30086 TCGACGATGATCTCTGTTGTGTAGCGGTCCTGACCGTCCTGCGCCTGCCACTTTCGAGTT 30145 || || | || ||| || ||||| |||||||||||||| | ||||||||||||| || Sbjct 30969 TCAACCACGACCTCAGTGGTGTATCGGTCCTGACCGTCTTTATCCTGCCACTTTCGGGTC 30910 Query 30146 CTGAGTGAACCCTCGACGTACAG-TTGCTGACCCTTCTTTACGTGCTGCCCGACGATCTC 30204 ||| || |||| || | ||| | || || || | || |||| | | ||||| Sbjct 30909 TGGAGCTTGCCTTCGATATAAACCTTGGAG-CCTTTATTGAGGTACTGCTGGGCAATCTC 30851 Query 30205 CGCCAACTTCCCGAAGAACACCACGCGGTGCCATTCGGTGCGCTCCTGTTGCTGGCCGGT 30264 ||||| ||||||||||| |||||| || ||||||||||| ||||| ||||||||||| Sbjct 30850 CGCCAGCTTCCCGAAGATCACCACCCGATGCCATTCGGTCTTTTCCTGCTGCTGGCCGGT 30791 Query 30265 CTGCTTGTCCTTCCAGCTCTCGCTGGTGGCGAGGGTGATGTTGGTCACCGCATTGCCGTT 30324 | ||| |||||||| ||| |||||||| || | || |||| ||| || || | Sbjct 30790 GTTCTTATCCTTCCATGCCTCACTGGTGGCCAGTGAGAGATTGGCCACGGCTGCACCCTG 30731 Query 30325 GGGCATATAGCGAGTTTCCGGGTCACCACCGACGTTGCCAACCAGAATGACTTTGTTAAC 30384 | || | ||| ||||| || | || | |||||| | ||||| |||||||| | Sbjct 30730 ACCCGTAAACCGAACATCCGGATCGTCGCCCAGGTTGCCGATTAGAATTACTTTGTTGAT 30671 Query 30385 GCCTCT 30390 |||||| Sbjct 30670 GCCTCT 30665 >seq11123 Length=1243 Score = 143 bits (158), Expect = 8e-30 Identities = 231/328 (70%), Gaps = 8/328 (2%) Strand=Plus/Plus Query 30067 CTGCATCTGCCCGTGCATGTCG---ACGATGATCTCTGTTGTGTAGCGGTCCTGACCGTC 30123 ||| ||||| |||| | | || || | || || || ||||| |||||||| |||| Sbjct 377 CTGAATCTGTCCGTTGAAGCCGGTGACCACGACTTCCGTGGTGTATCGGTCCTGGCCGTG 436 Query 30124 CTGCGCCTGCCACTTTCGAGTTCTGAGTGAACCCTCGACGTACAGTT-GCTGACCCTTCT 30182 | |||||||||| || || |||| || |||| ||| |||| |||| ||||| Sbjct 437 ATTGTCCTGCCACTTGCGGGTCTGGAGTTTGCCTTCGATGTAGAGTTTGCTG-CCCTTGC 495 Query 30183 TTACGTGCTGCCCGACGATCTCCGCCAACTTCCCGAAGAACACCACGCGGTGCCATTCGG 30242 || ||||| | | || || |||| ||| |||||| || | ||||||||| |||| Sbjct 496 GCACCAGCTGCTGGGCAATGTCTGCCAGCTTGCCGAAGGTGACGATGCGGTGCCACTCGG 555 Query 30243 TGCGCTCCTGTTGCTGGCCGGTCTGCTTGTCCTTCCAGCTCTCGCTGGTGGCGAGGGTGA 30302 | | |||||| |||| ||| || | ||||||||| |||| ||| || || ||| Sbjct 556 TTCTTTCCTGTGGCTGTCCGTTCCG---GTCCTTCCATTTCTCCGAGGTAGCAAGACTGA 612 Query 30303 TGTTGGTCACCGCATTGCCGTTGGGCATATAGCGAGTTTCCGGGTCACCACCGACGTTGC 30362 |||||| |||||| | ||| ||| ||||||| | ||||| ||||| | | Sbjct 613 TGTTGGCCACCGCTTCGCCACCGGGGGTATAGCGCACGACGGGGTCCTGCCCGACATGCC 672 Query 30363 CAACCAGAATGACTTTGTTAACGCCTCT 30390 ||||||| |||||||| ||||||||||| Sbjct 673 CAACCAGGATGACTTTATTAACGCCTCT 700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145602422126832