Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_023588.1 Length=33525 Score E Sequences producing significant alignments: (Bits) Value seq16867 87.8 4e-13 seq14711 87.8 4e-13 >seq16867 Length=7440 Score = 87.8 bits (96), Expect = 4e-13 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 3696 TTGAAGCGCTCGCCGGTCCAGAAGTCGAAGGCTTCATGCGCCATGGTGGACGGCGTGCTG 3755 ||| | |||||||| |||| || || | || || ||||| |||||| ||| | Sbjct 1628 TTGTAACGCTCGCCACTCCATAACTCATAAGCCGGGTGGCTCATGGCGGACGGGGTGGAG 1569 Query 3756 AAGTAGGTCTTGCGCCACTTCTTGTGCATCGCCATGCCGCTGGCGACCTTGTTCAGCTGG 3815 || ||||| || || || || || | |||||| | ||| ||||||||||| | Sbjct 1568 AAATAGGTTTTCCGGAACCGTTTCTGGCTGGCCATGGCTGCGGCCACCTTGTTCAGTTTT 1509 Query 3816 TTGAAACCGTAGGTCCAGAAGAACTCGTCAAAGTAGAAATTGCCGTGGTAGCCCTGTGCG 3875 | ||| | ||||||||| |||| ||||| |||||||| |||| ||||| ||| ||| Sbjct 1508 TCAAAATCCCGGGTCCAGAAATACTCATCAAAATAGAAATTTCCGTTGTAGCTCTGAGCG 1449 Query 3876 GTGCGGGCGTTGGTGC 3891 || || ||||||| Sbjct 1448 GTCATGGAATTGGTGC 1433 >seq14711 Length=7958 Score = 87.8 bits (96), Expect = 4e-13 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 3696 TTGAAGCGCTCGCCGGTCCAGAAGTCGAAGGCTTCATGCGCCATGGTGGACGGCGTGCTG 3755 ||| | |||||||| |||| || || | || || ||||| |||||| ||| | Sbjct 710 TTGTAACGCTCGCCACTCCATAACTCATAAGCCGGGTGGCTCATGGCGGACGGGGTGGAG 769 Query 3756 AAGTAGGTCTTGCGCCACTTCTTGTGCATCGCCATGCCGCTGGCGACCTTGTTCAGCTGG 3815 || ||||| || || || || || | |||||| | ||| ||||||||||| | Sbjct 770 AAATAGGTTTTCCGGAACCGTTTCTGGCTGGCCATGGCTGCGGCCACCTTGTTCAGTTTT 829 Query 3816 TTGAAACCGTAGGTCCAGAAGAACTCGTCAAAGTAGAAATTGCCGTGGTAGCCCTGTGCG 3875 | ||| | ||||||||| |||| ||||| |||||||| |||| ||||| ||| ||| Sbjct 830 TCAAAATCCCGGGTCCAGAAATACTCATCAAAATAGAAATTTCCGTTGTAGCTCTGAGCG 889 Query 3876 GTGCGGGCGTTGGTGC 3891 || || ||||||| Sbjct 890 GTCATGGAATTGGTGC 905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107131928057682