Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq16762 86.0 1e-11 >seq16762 Length=602608 Score = 86.0 bits (94), Expect = 1e-11 Identities = 121/166 (73%), Gaps = 3/166 (2%) Strand=Plus/Minus Query 183043 CAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATA 183102 ||| || ||| ||||| || ||||| |||| | || ||||||||||| || ||||| Sbjct 343817 CAGTTGTTGATTGAAGGCAAGATGCACGGTTTCCTGCGCATGTACTGGGCGAAGAAGATC 343758 Query 183103 CTTGAATGGACAAGAACTCCGG-AAGATGCTTTGAGTTATAGTATCTATATGAACAATAA 183161 ||||||||||| ||| |||| |||| | || ||| | | || || | ||| |||| Sbjct 343757 CTTGAATGGACTGAAACGCCGGAAAGAGGTTTGGAGGAAGCG-ATTTACCTCAACGATAA 343699 Query 183162 GTACGAACTAGACGGTACGGATCCTAACGGATACGTAGGTT-GTAT 183206 |||| || || || |||||||||||| || || |||| |||| Sbjct 343698 GTACAGTCTGGATGGACGGGATCCTAACGGTTATGTTGGTTCGTAT 343653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903176279210080