Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq18747 100 3e-16 seq9036 100 3e-16 seq3888 95.1 1e-14 seq13439 91.5 1e-13 >seq18747 Length=106157 Score = 100 bits (110), Expect = 3e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 |||||||| ||||| || | | | |||||||| || ||||||||||| |||| ||| || Sbjct 24105 CAAGCGCAGCACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCACTCAGGGTGCG 24046 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || || || | | |||| | | ||| |||||||| || |||||||| Sbjct 24045 GCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTC 23986 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || || || ||||| | || | || |||| ||||| || || | || Sbjct 23985 CTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGT 23926 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 | || || ||||| || || || | || ||||||||| || Sbjct 23925 AATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCT 23883 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 |||||||| ||||| || | | | |||||||| || |||||||||||||||| ||| || Sbjct 22965 CAAGCGCAGCACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCG 22906 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || || || | | |||| | | || |||||||| || |||||||| Sbjct 22905 ACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCTGGGGGAATGCCTTC 22846 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || || || ||||| | || | || || | ||||| || || | || Sbjct 22845 CTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGT 22786 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 | || || ||||| || || || | || ||||||||| || Sbjct 22785 AATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCT 22743 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 |||||||| ||||| || | | | ||||| || || |||||||||||||||| ||| || Sbjct 23193 CAAGCGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCG 23134 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || || || | | |||| | | ||| |||||||| || |||||||| Sbjct 23133 GCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTC 23074 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || || || ||||| | || | || || | ||||| || || | || Sbjct 23073 CTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGGCTCAACCTCAAGGGT 23014 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 | || || ||||| || || || | || ||||||||| || Sbjct 23013 AATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCT 22971 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||||| || | | | ||||| || || |||||||||||||||| ||| || | Sbjct 22505 CGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCA 22446 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| || || || |||| | |||| | | ||| |||||||| || |||||||| || Sbjct 22445 TCTTCCAGTTGCTTGCCGGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTG 22386 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || |||| | || | || || | |||||||| || | || | Sbjct 22385 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACCTCAAGGGTGATT 22326 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || || || || || | ||| |||||||| Sbjct 22325 GTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 22291 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 |||||||| ||||| || | | | |||||||| || ||||||||||| |||| ||| || Sbjct 22737 CAAGCGCAGCACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCACTCAGGGTGCG 22678 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || || || | | |||| | | ||| |||||||| || |||||||| Sbjct 22677 GCCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCTTC 22618 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || || || ||| | | || | || || | ||||| || || | || Sbjct 22617 CTTGTCCTGGATCTTAGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGT 22558 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 | || || ||||| || || || | || ||||||||| || Sbjct 22557 AATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCT 22515 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 |||||||| ||||| || | | | ||||| || || ||||||||||| |||| ||| || Sbjct 23649 CAAGCGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTCAGGGTGCG 23590 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || || || | | |||| | | ||| |||||||| || |||||||| Sbjct 23589 ACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTC 23530 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || || || ||||| | || | || || | ||||| || || | || Sbjct 23529 CTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGT 23470 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 | || || ||||| || || || | || ||||||||| || Sbjct 23469 AATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCT 23427 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 |||||||| ||||| || | | | ||||| || || ||||||||||| |||| ||| || Sbjct 23877 CAAGCGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTCAGGGTGCG 23818 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || || || | | |||| | | ||| |||||||| || |||||||| Sbjct 23817 ACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTC 23758 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || || || ||||| | || | || || | ||||| || || | || Sbjct 23757 CTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGGCTCAACCTCAAGGGT 23698 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 | || || ||||| || || || | || ||||||||| || Sbjct 23697 AATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCT 23655 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| |||| ||||| || | | | ||||| || || ||||||||||| |||| ||| || Sbjct 24333 CAAACGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTCAGGGTGCG 24274 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || || || | | |||| | | ||| |||||||| || |||||||| Sbjct 24273 ACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTC 24214 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || || || ||||| | || | || |||| ||||| || || | || Sbjct 24213 CTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGT 24154 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 | || || ||||| || || || | || ||||||||| || Sbjct 24153 AATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCT 24111 >seq9036 Length=11236 Score = 100 bits (110), Expect = 3e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 |||||||| ||||| || | | | ||||| || || |||||||||||||||| ||| || Sbjct 10763 CAAGCGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCG 10822 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || || || | | |||| | | ||| |||||||| || |||||||| Sbjct 10823 ACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTC 10882 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || || || ||||| | || | || |||| ||||| || || | || Sbjct 10883 CTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGT 10942 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 | || || ||||| || || || | || ||||||||| || Sbjct 10943 AATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCT 10985 Score = 100 bits (110), Expect = 3e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 |||||||| ||||| || | | | ||||| || || |||||||||||||||| ||| || Sbjct 10991 CAAGCGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCG 11050 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || || || | | |||| | | ||| |||||||| || |||||||| Sbjct 11051 ACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTC 11110 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || || || ||||| | || | || |||| ||||| || || | || Sbjct 11111 CTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGT 11170 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 | || || ||||| || || || | || ||||||||| || Sbjct 11171 AATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCT 11213 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| |||| ||||| || | | | ||||| || || |||||||||||||||| ||| || Sbjct 10535 CAAACGCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCG 10594 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 |||||| || || || || | | |||| | | ||| |||||||| || |||||||| Sbjct 10595 ACCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTC 10654 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 || || || || ||||| | || | || |||| ||||| || || | || Sbjct 10655 CTTGTCCTGGATCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGT 10714 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 | || || ||||| || || || | || ||||||||| || Sbjct 10715 AATGGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATGCCT 10757 >seq3888 Length=367485 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| || || |||||||||||||||| ||| || | Sbjct 211477 CGCAACACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCA 211418 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| || || || || | | |||| | | ||| |||||||| || |||||||| || Sbjct 211417 TCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCTTCCTTG 211358 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || |||| | || | || || | |||||||| || | || | Sbjct 211357 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACCTCAAGGGTGATG 211298 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGA 132125 || || ||||| || || || | || |||||||||| Sbjct 211297 GTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCATGA 211261 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| || || |||||||||||||||| ||| || | Sbjct 211705 CGCAACACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCA 211646 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| || || || || | | |||| | | ||| |||||||| || |||||||| || Sbjct 211645 TCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCTTCCTTG 211586 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || |||| | || | || || | |||||||| || | || | Sbjct 211585 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACCTCAAGGGTGATG 211526 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || ||||| || || || | || ||||||||| Sbjct 211525 GTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCATG 211490 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | | ||||| || || |||||||||||||||| ||| || | Sbjct 211933 CGCAACACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCA 211874 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| || || || || | | |||| | | ||| |||||||| || |||||||| || Sbjct 211873 TCTTCCAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCTTCCTTG 211814 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || |||| | || | || || | |||||||| || | || | Sbjct 211813 TCCTGGATCTTGGCCTTCACATTCTCTATGGTGTCTGAGGGCTCCACCTCAAGGGTGATG 211754 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || ||||| || || || | || ||||||||| Sbjct 211753 GTCTTGCCAGTTAGGGTCTTCACAAAGATCTGCATG 211718 >seq13439 Length=213493 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||||| || | | ||||||| || |||||||||||||| |||| ||| || | Sbjct 37603 CGCAGCACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCACTCAGGGTGCGACCA 37544 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || ||||| || || | | |||| | | ||| |||||||| || ||||| || || Sbjct 37543 TCCTCAAGCTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCCTCCTTG 37484 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || || | | ||| | ||||| | |||||||| || | || | Sbjct 37483 TCTTGGATCTTGGCCTTGACATTTTCGATCGTATCAGATGGCTCCACCTCAAGGGTGATG 37424 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||| || || | || |||||||| Sbjct 37423 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 37389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476487263215080