Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_026608.1 Length=42093 Score E Sequences producing significant alignments: (Bits) Value seq1283 87.8 5e-13 >seq1283 Length=34873 Score = 87.8 bits (96), Expect = 5e-13 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 34648 TTTGCGGGCGAACAAAGCGGCATTTACAAGGCGCTGTTTATCACGTCTAAAGCGTTTGCT 34707 ||||| || || ||| ||| || || |||| | ||||| | | || || ||||| || Sbjct 9569 TTTGCCGGTGAGCAATCCGGAATCTATAAGGTGATGTTTGCCGCCTCCAAGGCGTTCGCC 9628 Query 34708 ATCGCCGATAGCATTATGAAAATTCAACAGGGTATTGCAAACGCAATGGCCCTACCGTTC 34767 || ||||| || ||||||||||| || ||||| ||||| || || ||| | ||||| Sbjct 9629 ATTGCCGACAGTATTATGAAAATCCAGCAGGGCATTGCCAATGCGGCCGCCATGCCGTTT 9688 Query 34768 CCGGCTAACCTTGCCGCAGCCGCGACCGTCGCAGCGCAAGCCGCTAGCATTGT 34820 || || ||| | | || || || || || || ||| |||| |||||||| Sbjct 9689 CCTGCCAACATCGGTGCCATGGCCACAGTGGCCGCACAAACCGCCAGCATTGT 9741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134542754933730