Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_026610.2 Length=56637 Score E Sequences producing significant alignments: (Bits) Value seq1283 102 3e-17 >seq1283 Length=34873 Score = 102 bits (112), Expect = 3e-17 Identities = 170/245 (69%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 34123 AATGGTGCTCACGATACCTGCGGTAGCCGACGCCACTGTGGCCATAGCTGGTAGGTTAGC 34182 ||||||| | || || | ||||| | |||||||||||||| || | ||| || Sbjct 9751 AATGGTGGTAACAATGCTGGCGGTTTGTGCGGCCACTGTGGCCATGGCACCGATGTTGGC 9692 Query 34183 TGGGAACGGTAGTGCCGCTGCACCTGCAATACCTTGTTGGATCTTCATGATCGCATCCGC 34242 || ||||| | || || ||| ||||| || || ||||| ||||| || || || Sbjct 9691 AGGAAACGGCATGGCGGCCGCATTGGCAATGCCCTGCTGGATTTTCATAATACTGTCGGC 9632 Query 34243 AATCGCGAACGCTTTTGAAGCCGCAAACATGACCTTGTAAAGTGCCGACTGTTCACCTGC 34302 ||| |||||||| || || || |||||||| ||||| || | | | || || ||||| || Sbjct 9631 AATGGCGAACGCCTTGGAGGCGGCAAACATCACCTTATAGATTCCGGATTGCTCACCGGC 9572 Query 34303 AAAGGTCTTGGATAGATCGGCTAGGCCATCGAAGAGTTGCGCACTTGAGTTCCATAGAAG 34362 |||||| | | || |||| | ||||| || || || || || |||| ||| | Sbjct 9571 AAAGGTTTCCGCCAGTCCGGCCATCCCATCAAACAGCTGGGCGCT---GTTCTGTAGTTG 9515 Query 34363 CTGGC 34367 ||||| Sbjct 9514 CTGGC 9510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181072057698114