Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_027339.1 Length=38389 Score E Sequences producing significant alignments: (Bits) Value seq1283 118 3e-22 >seq1283 Length=34873 Score = 118 bits (130), Expect = 3e-22 Identities = 261/386 (68%), Gaps = 23/386 (6%) Strand=Plus/Plus Query 557 TACCCCAACGTAAATGCTGCCAATCAGTATGCCCGTGATGTCGTGCGCGGAAAGATTGTG 616 |||||||| || ||| | ||||||| ||||| || ||||| || |||| || || | Sbjct 498 TACCCCAATGTTAATTCGGCCAATCGTTATGCGCGGGATGTAGTCAGCGGCAAAATCATT 557 Query 617 GCCTGCCAGTTTGTGATTCAGGCCTGCCAGCGCCATCTTGATGACCTG----ATGGCGGA 672 ||||||| | ||| | ||| || || || || || ||||| ||| || | | Sbjct 558 GCCTGCCGTTATGTTCGCCTGGCTTGTCAACGTCACCTGGATGATCTGGGAAATTCCAAA 617 Query 673 AAAAAGTAAGTCGTTTCGTTACCGCTTCGACAAGGACCTGGCTGAACGGGCCGCGAAATT 732 |||||| | | | ||||| ||||| | ||| |||||||| ||| ||||| Sbjct 618 AAAAAGGATTAC----CCCTACCGATTCGATAGAGACAAAGCTGAACGAGCCTGTAAATT 673 Query 733 TATTCAGCTGTTGCCACACACCAAGGGGGAGTGGGCATTCAAGAG-------GA--TGCC 783 ||||||||| | || || ||||| || ||||||||| ||| | || || Sbjct 674 TATTCAGCTTCTCCCCCATACCAAAGGAGAGTGGGCAAGAAAGCGCGGGCCTGAAGGGCT 733 Query 784 CATCACACTGGAACCGTGGCAGCTCTTTGTGATCT--GCTGTGCGTTTGGCTGGGTCAAT 841 || || |||||| ||||| | ||| | |||| || || |||||||||||| | Sbjct 734 AATAACGCTGGAAAGCTGGCAACGGTTTATTATCTCGGCGGT--GTTTGGCTGGGTTTTT 791 Query 842 AAAGGCTCCCGGC-TGCGCCGCTTCAGGGAGGTGTATACCGAAATCCCCCGTAAGAACGG 900 ||| | | ||| | || || ||||| || || |||| |||||| | || || || || Sbjct 792 AAA-TCAACGGGCTTACGTCGTTTCAGTGAAGTTTATAACGAAATTTCACGGAAAAATGG 850 Query 901 CAAATCGGCAATCTCTGCCGGTGTTG 926 ||||| ||||| |||| ||||||| Sbjct 851 TAAATCCGCAATAACTGCGGGTGTTG 876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122692882997586