Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_027368.1 Length=33828 Score E Sequences producing significant alignments: (Bits) Value seq16867 95.1 3e-15 seq14711 95.1 3e-15 >seq16867 Length=7440 Score = 95.1 bits (104), Expect = 3e-15 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 15459 TCCCCAGTCCAGAACGGGTAAGCGGGGTGCATTTTGGTTGAAGGGGTGGAAAAGTACGTC 15518 || ||| |||| ||| ||||| ||||| | ||| || |||||||| || || || Sbjct 1619 TCGCCACTCCATAACTCATAAGCCGGGTGGCTCATGGCGGACGGGGTGGAGAAATAGGTT 1560 Query 15519 TTGCGCCACTTCTTATGCGTGGCCATCGCTGAGGCGACTTTGTTCAGCTCGTCAAACTTG 15578 || || || || || ||||||| |||| ||| || |||||||| | ||||| | Sbjct 1559 TTCCGGAACCGTTTCTGGCTGGCCATGGCTGCGGCCACCTTGTTCAGTTTTTCAAAATCC 1500 Query 15579 CCGATCCAGAAATACTCATCCACATACACATGGCCGTGGTAACTCTGCGCTGTTTTGCCA 15638 | | |||||||||||||||| | ||| | || |||| ||| ||||| || || || | Sbjct 1499 CGGGTCCAGAAATACTCATCAAAATAGAAATTTCCGTTGTAGCTCTGAGCGGTCATGGAA 1440 Query 15639 TTGGT 15643 ||||| Sbjct 1439 TTGGT 1435 >seq14711 Length=7958 Score = 95.1 bits (104), Expect = 3e-15 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 15459 TCCCCAGTCCAGAACGGGTAAGCGGGGTGCATTTTGGTTGAAGGGGTGGAAAAGTACGTC 15518 || ||| |||| ||| ||||| ||||| | ||| || |||||||| || || || Sbjct 719 TCGCCACTCCATAACTCATAAGCCGGGTGGCTCATGGCGGACGGGGTGGAGAAATAGGTT 778 Query 15519 TTGCGCCACTTCTTATGCGTGGCCATCGCTGAGGCGACTTTGTTCAGCTCGTCAAACTTG 15578 || || || || || ||||||| |||| ||| || |||||||| | ||||| | Sbjct 779 TTCCGGAACCGTTTCTGGCTGGCCATGGCTGCGGCCACCTTGTTCAGTTTTTCAAAATCC 838 Query 15579 CCGATCCAGAAATACTCATCCACATACACATGGCCGTGGTAACTCTGCGCTGTTTTGCCA 15638 | | |||||||||||||||| | ||| | || |||| ||| ||||| || || || | Sbjct 839 CGGGTCCAGAAATACTCATCAAAATAGAAATTTCCGTTGTAGCTCTGAGCGGTCATGGAA 898 Query 15639 TTGGT 15643 ||||| Sbjct 899 TTGGT 903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108101288531940