Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2620 114 1e-20 >seq2620 Length=811290 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 || ||| | || ||||| ||||| |||||||| |||||||||||||||||||| | ||| Sbjct 744561 TTCGTCATTTTCCCAATACAATACCATGACATCTGGCAAATGTACAAAAAAGCTGAAGCG 744502 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCA-TT 43818 || || ||||| ||||| || || || | | |||||| | | || ||| ||| | Sbjct 744501 TCTTTCTGGACGGCAGAGGAGGTCGACCTCTCAAAAGACGTTTCTCACTGG-GAGCAGCT 744443 Query 43819 AAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGG 43878 |||||| | || || || || ||| ||| |||| ||||| ||||| ||||| || Sbjct 744442 GAAACCAGACGAGCGTCACTTCATTTCTCATGTTCTGGCTTTTTTCGCTGCCAGCGATGG 744383 Query 43879 GATAGTCAATGAAAATTTGGTTAGT 43903 || || ||||||||| | || ||| Sbjct 744382 AATTGTTAATGAAAATCTTGTAAGT 744358 Score = 93.3 bits (102), Expect = 3e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 ||||||||||| | ||||||| |||| || ||||| || || ||||| || || |||| Sbjct 744287 AAGAAGTTCAAGTCACAGAAGCGAGATGCTTCTATGGATTCCAGATTGCGATTGAGAATA 744228 Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA 44019 | || || ||||||||||| || || || ||||| |||||||| || Sbjct 744227 TCCACTCAGAAATGTACAGCCTGCTAATTGATACATACATCAAGGA 744182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397355230372015