Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq1283 104 6e-18 >seq1283 Length=34873 Score = 104 bits (114), Expect = 6e-18 Identities = 198/287 (69%), Gaps = 6/287 (2%) Strand=Plus/Plus Query 41172 AACAAAGTAGAAATCATTGGCAACTTAGGCAACGATCCAGAAATCCG--TTACATGCCAA 41229 ||||||||| | || |||||| | ||| ||||||| || | || |||| | || Sbjct 30674 AACAAAGTAATTCTAATCGGCAACCTGGGCGACGATCCGGATGTTCGGTTTACGGGTCAG 30733 Query 41230 GCGGCGGCGCGGTTGCTAATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCA 41289 | || || || || ||||| | ||||| | ||| ||||||||||| | || Sbjct 30734 GGTGCAGCC--GTGGCCAATCTCTCACTGGCCACCAGTGAGGCATGGAAGGATAAGAACA 30791 Query 41290 CCGGCGAGAAGAAAGAACAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAG 41349 ||||| || || | ||| | || |||||||| || || || |||||||| |||||||| | Sbjct 30792 CCGGCCAGCAGCAGGAAAAGACCGAATGGCATCGGGTGGTGATCTTCGGGAAGCTGGCGG 30851 Query 41350 AAATTG-CTAGCGAATACCTGCGCAAAGGTAGCAAGGTGTTCATTGAAGGCAGCCTGCGA 41408 | |||| | ||| | ||||| ||||| |||||| | || ||||||| || | Sbjct 30852 AGATTGCCCAGC-AGTACCTCAATAAAGGCTCCAAGGTTTATATCGAAGGCAAGCTCCAG 30910 Query 41409 ACGCGTAAATGGCAGGACCAGGCTGGCGTTGATCGCTACACCACTGA 41455 || || || |||||||| | | || || || ||||||||||| Sbjct 30911 ACCCGAAAGTGGCAGGATAAAGACGGTCAGGACCGATACACCACTGA 30957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133176692483208