Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq20156 100 3e-16 >seq20156 Length=513389 Score = 100 bits (110), Expect = 3e-16 Identities = 155/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 104616 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 104675 |||| || |||||||||||||| || | | || ||||| || | ||| ||| | Sbjct 226580 TCTACCTGGAGCCATGGCACGCAGACGTTTTTGATTTCCTCGATT---GTCGCAAGAACA 226636 Query 104676 GTGACGAGGAGGCGCGGTGCC---GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCT 104732 | | |||||| | | | | ||||| |||| ||| || |||||||| ||||| | Sbjct 226637 CCGGCAAGGAGGAACAGAGAGCGAGGGATCTGTTCTACGCCCTTTGGATTCCTGATCTGT 226696 Query 104733 TCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTG 104792 |||||||| |||||||| ||| || ||||||| ||| | ||||| || || |||| Sbjct 226697 TCATGAAGCGAGTTGAGCAGAACGGAGATTGGTCGCTCATGTGTCCCCACGAGAGCCCTG 226756 Query 104793 GTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTA 104832 | ||| || | | ||| || ||||||||||| ||||| Sbjct 226757 GCCTCAGTGACGTCTGGGGCGAAGAGTTTGAAGCTCTTTA 226796 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 105506 AACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 105565 ||||||||||||||||||||||||||||| ||||| ||||| || || | || || ||| Sbjct 227768 AACAGTCTCCTCATGGCTCCAATGCCAACCGCCTCAACCGCTCAGATTCTCGGAAACAAT 227827 Query 105566 GAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTT 105625 || | |||||| ||||| | |||||||| || || ||| | ||||| || Sbjct 227828 GAGTCAACTGAACCATACACTAGCAACATCTACACTCGACGAGTTCTCTCTGGAGAATTC 227887 Query 105626 GTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGAT 105685 | | |||||| | || | || | || || | || | ||| || ||| | | || Sbjct 227888 CAGGTCGTCAACCACCACTTACTGAAGGATCTGACTGAAAATGGACTGTGGAACGATGAC 227947 Query 105686 ATGAAGGATCTCATG 105700 |||||| ||| |||| Sbjct 227948 ATGAAGAATCGCATG 227962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583109130319720