Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq20156 111 2e-19 >seq20156 Length=513389 Score = 111 bits (122), Expect = 2e-19 Identities = 155/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 19491 CGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCC 19550 |||| ||||||||||| |||||||||||||| ||||| | ||||||||||| ||| Sbjct 226571 CGTTTGCCATCTACCTGGAGCCATGGCACGCAGACGTTTTTGATTTCCTCGATTGTCGCA 226630 Query 19551 TGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTC-ACGGCCTTGTGGATTCCG 19609 |||| || | ||||| | | | || || ||| ||| |||| |||||||| Sbjct 226631 AGAACACCGGCAAGGAGGAACAGAGAGCGAGGGATCTGTTCTACGCCCTT-TGGATTCCT 226689 Query 19610 GACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAA 19669 || || |||||| || |||||| || ||| ||| ||| || ||||| || ||||| Sbjct 226690 GATCTGTTCATGAAGCGAGTTGAGCAGAACGGAGATTGGTCGCTCATGTGTCCCCACGAG 226749 Query 19670 TGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTT 19704 |||||||||| ||||||| ||||| | ||| Sbjct 226750 AGCCCTGGCCTCAGTGACGTCTGGGGCGAAGAGTT 226784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548382162982320