Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq8670 87.8 2e-12 >seq8670 Length=295310 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 89198 CGATCCTGTCTTGCATATAGAACTTAGGAGGTGGGCTGATATATTTATTATCGCGCCACT 89257 ||| || || |||| || || || | | ||||| || || | | | ||||| || || Sbjct 125844 CGACCCAGTGCTGCACATTGAGCTCCGCAAATGGGCCGACATCTGTCTCATCGCTCCTCT 125785 Query 89258 AACGGCTAATACTCTAGCGAAGATAGCTAATGGTATATGCGACAACTTACTAACTTCTAT 89317 || || || || |||||| | || |||| || || || |||||||| || | | Sbjct 125784 TGATGCGAACACACTGGCGAAGGTCGCGCATGGAATGTGTGATAACTTACTGACGTGCGT 125725 Query 89318 AGTTAGGGCATGGGATATATCAAAGCCCCTTATTTTTTGTCCTGCCATGAATACTCTAAT 89377 ||| ||||| ||||| | || |||| || | ||| ||| || ||||| |||||||| Sbjct 125724 AGTGAGGGCGTGGGACCTGACACAGCCGCTCCTGTTTGCTCCGGCAATGAACACTCTAAT 125665 Query 89378 GTGGGAACATCCTATTAC 89395 |||||| ||||| || || Sbjct 125664 GTGGGATCATCCAATCAC 125647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603023950372720