Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq13439 122 8e-23 >seq13439 Length=213493 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||| |||||| | || || ||||| ||||| || || Sbjct 37389 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGGAGCCATCT 37448 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | ||||| || || |||||||| || ||||| || || ||||| Sbjct 37449 GATACGATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGATCAG 37508 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || ||||| || | || || || ||| | || |||||| Sbjct 37509 CAGAGATTGATCTTTGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTGAGTGACTACAAC 37568 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||||| ||| | || ||||| ||||| || | || ||||| Sbjct 37569 ATTCAGAAGGAGTCAACCCTTCACTTGGTGCTGCGTCTGAGAGGAGGCAT 37618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434805304906560