Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq11123 154 6e-33 seq1283 150 7e-32 >seq11123 Length=1243 Score = 154 bits (170), Expect = 6e-33 Identities = 231/327 (71%), Gaps = 6/327 (2%) Strand=Plus/Minus Query 7276 AGAGGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTAC 7335 ||||| ||||| |||||||| |||||||| | ||||| ||||| | ||||| Sbjct 700 AGAGGCGTTAATAAAGTCATCCTGGTTGGGCATGTCGGGCAGGACCCCGTCGTGCGCTAT 641 Query 7336 ATGCCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGAC 7395 | ||| ||| | |||||| ||||||||| || || ||| |||| ||||||||| Sbjct 640 ACCCCCGGTGGCGAAGCGGTGGCCAACATCAGTCTTGCTACCTCGGAGAAATGGAAGGAC 581 Query 7396 AAGCAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGC 7455 | || ||| |||| ||||||| | |||||| |||||| | || |||||| Sbjct 580 ---CGGAACGGACAGCCACAGGAAAGAACCGAGTGGCACCGCATCGTCACCTTCGGCAAG 524 Query 7456 CTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGC 7515 ||||| || || ||| || |||||||||| | | ||||| ||||||||| Sbjct 523 CTGGCAGACATTGCCCAGCAGCTGGTGCGCAAGGGCAGCAAACTCTACATCGAAGGCAAA 464 Query 7516 CTGCGCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATC 7575 || | |||||||||||||||| | |||||||||||||||||||||| || || | Sbjct 463 CTCCAGACCCGCAAGTGGCAGGACAATCACGGCCAGGACCGATACACCACGGAAGTCGTG 404 Query 7576 GT---CGACATGCACGGACAGATGCAG 7599 || || | | |||||||||| ||| Sbjct 403 GTCACCGGCTTCAACGGACAGATTCAG 377 >seq1283 Length=34873 Score = 150 bits (166), Expect = 7e-32 Identities = 166/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 7351 GCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAGCAGACCGGCCAG 7410 || ||| |||| || | || |||||||| ||| |||||||| ||| | ||||||||| Sbjct 30740 GCCGTGGCCAATCTCTCACTGGCCACCAGTGAGGCATGGAAGGATAAGAACACCGGCCAG 30799 Query 7411 CAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTGGCGGAGATCGCC 7470 || |||||| |||| | || || |||||| ||||||| ||||||||||| ||| Sbjct 30800 CAGCAGGAAAAGACCGAATGGCATCGGGTGGTGATCTTCGGGAAGCTGGCGGAGATTGCC 30859 Query 7471 GGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTGCGCACCCGCAAG 7530 ||||||| || || ||| |||| || ||||||||| || | ||||| ||| Sbjct 30860 CAGCAGTACCTCAATAAAGGCTCCAAGGTTTATATCGAAGGCAAGCTCCAGACCCGAAAG 30919 Query 7531 TGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGT 7571 ||||||| | | ||||| ||||||||||||||||| ||||| Sbjct 30920 TGGCAGGATAAAGACGGTCAGGACCGATACACCACTGAGGT 30960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194771072717166