Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq18747 125 5e-24 seq9036 120 2e-22 seq3888 102 6e-17 >seq18747 Length=106157 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || || || || || ||||| || || Sbjct 22975 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCG 23034 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | ||||| ||||| | || |||||||| Sbjct 23035 GACACCATTGAGAATGTGAAAGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCAGATCA 23093 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| ||||| ||||||||||| | ||||| | |||| ||||| Sbjct 23094 GCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTGAGCGACTACAA 23153 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || |||||||| | || || || | | ||| ||||||| Sbjct 23154 CATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 23201 Score = 122 bits (134), Expect = 6e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || |||||||| || || || ||||| || || || || || | Sbjct 22290 AATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACAATCACCCTTGAGGTGGAGCCCTC 22349 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| |||| ||| | || | || | | ||||| ||||| | || ||||||| Sbjct 22350 AGACACCATTGAGAATGTGAAGGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCAGATC 22408 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | || || ||||||||||| ||||||||||| | ||||| | |||| |||| Sbjct 22409 AGCAGAGATTGATCTTTGCCGGCAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACA 22468 Query 23789 ACATACAAAAAGAGTCCAC 23807 |||| || || |||||||| Sbjct 22469 ACATCCAGAAGGAGTCCAC 22487 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || || || || || ||||| || | Sbjct 22519 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCA 22578 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | ||||| ||||| | || |||||||| Sbjct 22579 GACACCATTGAGAATGTCAAAGCTAAGA-TCCAGGACAAGGAAGGCATCCCCCCAGATCA 22637 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| ||||| ||||||||||| | ||||| | | || ||||| Sbjct 22638 GCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTGAGTGACTACAA 22697 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || ||||||||||| | || || || | | ||| ||||||| Sbjct 22698 CATCCAGAAAGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 22745 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || || || || || ||||| || | Sbjct 22747 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCA 22806 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | ||||| ||||| | || |||||||| Sbjct 22807 GACACCATTGAGAATGTGAAAGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCAGATCA 22865 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | || || ||||| ||||| ||||||||||| | ||||| | |||| ||||| Sbjct 22866 GCAAAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAA 22925 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || ||||||||||| | || || || | | ||| ||||||| Sbjct 22926 CATCCAGAAAGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 22973 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || || || || || ||||| || || Sbjct 23659 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCG 23718 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | ||||| ||||| | || |||||||| Sbjct 23719 GACACCATTGAGAATGTGAAAGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCAGATCA 23777 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| ||||| ||||||||||| | ||||| | | || ||||| Sbjct 23778 GCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGTGACTACAA 23837 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || |||||||| | || || || | | ||| ||||||| Sbjct 23838 CATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 23885 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || || || || || ||||| || | Sbjct 23887 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCC 23946 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | ||||| ||||| | || |||||||| Sbjct 23947 GACACCATTGAGAATGTGAAAGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCAGATCA 24005 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| ||||| ||||||||||| | ||||| | | || ||||| Sbjct 24006 GCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGCCGCACCCTGAGTGACTACAA 24065 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || ||||||||||| | || || || | | ||| ||||||| Sbjct 24066 CATCCAGAAAGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 24113 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || || || || || ||||| || | Sbjct 23431 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCA 23490 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | ||||| ||||| | || |||||||| Sbjct 23491 GACACCATTGAGAATGTGAAAGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCAGATCA 23549 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| ||||| ||||||||||| | ||||| | | || ||||| Sbjct 23550 GCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGTGACTACAA 23609 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || |||||||| | || || || | | ||| ||||||| Sbjct 23610 CATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 23657 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || || || || || ||||| || | Sbjct 23203 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCA 23262 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || | | ||||| ||||| | || |||||||| Sbjct 23263 GACACCATTGAGAATGTCAAGGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCAGATCA 23321 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| ||||| ||||||||||| | ||||| | |||| ||||| Sbjct 23322 GCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAA 23381 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 23382 CATCCAGAAGGAGTCCAC 23399 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || || || || || ||||| || | Sbjct 24115 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCC 24174 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | ||||| ||||| | || |||||||| Sbjct 24175 GACACCATTGAGAATGTGAAAGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCAGATCA 24233 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| ||||| ||||||||||| | ||||| | | || ||||| Sbjct 24234 GCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGTGACTACAA 24293 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 24294 CATCCAGAAGGAGTCCAC 24311 >seq9036 Length=11236 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || || || || || ||||| || | Sbjct 10753 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCC 10694 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | ||||| ||||| | || |||||||| Sbjct 10693 GACACCATTGAGAATGTGAAAGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCAGATCA 10635 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| ||||| ||||||||||| | ||||| | |||| ||||| Sbjct 10634 GCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAA 10575 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || |||||||| | || || || | | ||| ||||||| Sbjct 10574 CATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGTTTGAGAGGAGG 10527 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || || || || || ||||| || | Sbjct 10981 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCC 10922 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | ||||| ||||| | || |||||||| Sbjct 10921 GACACCATTGAGAATGTGAAAGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCAGATCA 10863 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| ||||| ||||||||||| | ||||| | |||| ||||| Sbjct 10862 GCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAA 10803 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || |||||||| | || || || | | ||| ||||||| Sbjct 10802 CATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 10755 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || |||||||| || || || || || || || ||||| || | Sbjct 11209 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACCCTTGAGGTTGAGCCCTCC 11150 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| | || | | ||||| ||||| | || |||||||| Sbjct 11149 GACACCATTGAGAATGTGAAAGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCAGATCA 11091 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| ||||| ||||||||||| | ||||| | |||| ||||| Sbjct 11090 GCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAA 11031 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || || |||||||| | || || || | | ||| ||||||| Sbjct 11030 CATCCAGAAGGAGTCCACCCTTCACTTGGTGCTGCGCTTGAGAGGAGG 10983 >seq3888 Length=367485 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| || || || || ||||| || || || || || | Sbjct 211263 ATGCAGATCTTTGTGAAGACCCTAACTGGCAAGACCATCACCCTTGAGGTGGAGCCCTCA 211322 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || | | ||||| ||||| | || |||||||| Sbjct 211323 GACACCATTGAGAATGTGAAGGCCAAGA-TCCAGGACAAGGAAGGCATCCCCCCAGATCA 211381 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || || ||||||||||| | ||||| | |||| ||||| Sbjct 211382 GCAGAGATTGATCTTTGCTGGAAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAA 211441 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 211442 CATCCAGAAGGAGTCCAC 211459 Score = 102 bits (112), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| || || || || ||||| || || || || || | Sbjct 211491 ATGCAGATCTTTGTGAAGACCCTAACTGGCAAGACCATCACCCTTGAGGTGGAGCCCTCA 211550 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | || | | ||||| ||||| | || |||||||| Sbjct 211551 GACACCATTGAGAATGTGAAGGCCAAGA-TCCAGGACAAGGAAGGCATCCCCCCAGATCA 211609 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || || ||||||||||| | ||||| | |||| ||||| Sbjct 211610 GCAGAGATTGATCTTTGCTGGAAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAA 211669 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 211670 CATCCAGAAGGAGTCCAC 211687 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||||| || || || || ||||| || || || || || | Sbjct 211719 ATGCAGATCTTTGTGAAGACCCTAACTGGCAAGACCATCACCCTTGAGGTGGAGCCCTCA 211778 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | | ||||| ||||| | || |||||||| Sbjct 211779 GACACCATAGAGAATGTGAAGGCCAAGA-TCCAGGACAAGGAAGGCATCCCCCCAGATCA 211837 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || || ||||||||||| | ||||| | |||| ||||| Sbjct 211838 GCAGAGATTGATCTTTGCTGGAAAGCAACTGGAAGATGGTCGCACCCTGAGCGACTACAA 211897 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || || |||||||| | || || || || | || |||| ||| Sbjct 211898 CATCCAGAAGGAGTCCACCCTTCACTTGGTGTTGCGTCTGAGAGGGGGA 211946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337923902207924