Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2620 102 7e-17 >seq2620 Length=811290 Score = 102 bits (112), Expect = 7e-17 Identities = 87/106 (82%), Gaps = 1/106 (1%) Strand=Plus/Plus Query 4813 CTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAA 4872 ||||| | || || || ||||| ||||| |||||||| || || ||||| || || |||| Sbjct 744184 CTTGA-TGTATGTATCAATTAGCAGGCTGTACATTTCTGAGTGGATATTCTCAATCGCAA 744242 Query 4873 TCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTT 4918 |||| ||||| || |||||||| |||||||| ||||||||||| || Sbjct 744243 TCTGGAATCCATAGAAGCATCTCGCTTCTGTGACTTGAACTTCTTT 744288 Score = 102 bits (112), Expect = 7e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 4938 TTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTAC 4997 ||||| || || || || || ||||| || ||||| |||| ||||||||| || |||| Sbjct 744368 TTTTCATTAACAATTCCATCGCTGGCAGCGAAAAAAGCCAGAACATGAGAAATGAAGTGA 744427 Query 4998 TGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCA 5057 | ||||| || || || | | |||||| | | ||||| | | || || || || Sbjct 744428 CGCTCGTCTGGTTTCAGCTGCTCCCAGTGAGAAACGTCTTTTGAGAGGTCGACCTCCTCT 744487 Query 5058 ACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATC 5117 | ||||| || |||||||| |||||||||||||| ||| || ||| | || || || Sbjct 744488 GCCGTCCAGAAAGACGCTTCAGCTTTTTTGTACATTTGCCAGATGTCATGGTATTGTATT 744547 Query 5118 GGAAGTATGACAAATC 5133 || | ||||| |||| Sbjct 744548 GGGAAAATGACGAATC 744563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426941327312399