Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq11361 86.0 2e-12 >seq11361 Length=1230 Score = 86.0 bits (94), Expect = 2e-12 Identities = 109/149 (73%), Gaps = 1/149 (1%) Strand=Plus/Plus Query 34069 AACATGATCACGTCGGCGTCCTGCTCGATCGCCCCGGACTCGCGCAGGTCCGACATCATC 34128 ||||| || ||||| |||||||||||||| || || || || || ||||| || | | Sbjct 13 AACATAATGACGTCAGCGTCCTGCTCGATGGCGCCTGATTCACGAAGGTCAGAGTTTACA 72 Query 34129 GGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGTTGAGCTGCGACAGCACGATCACGGGG 34188 || || ||||| || | |||||| || || ||||| ||||| ||||| | || || || Sbjct 73 GGACGTTTGTTTGGTCTCTGCTCAAGAGAACGGTTCAGCTGAGACAGTGCAATAACCGGT 132 Query 34189 ATACCAAGCTCCATGGCCAGTAGCTTGCA 34217 | | | |||| ||| || |||||| || Sbjct 133 ACTTCGAACTCCTTGG-CAATAGCTTTCA 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160424359675470