Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_030940.1 Length=32637 Score E Sequences producing significant alignments: (Bits) Value seq16867 86.0 1e-12 seq14711 86.0 1e-12 >seq16867 Length=7440 Score = 86.0 bits (94), Expect = 1e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 13039 CGGAACACTTCGGACTGGGCGCGGCTCGCGGACAGGAAAATCTGGTTGTCCCCGGTCAGC 13098 |||||||| || | |||||| | | ||||| | ||||||||||| || |||||| || Sbjct 1325 CGGAACACCTCCGCCTGGGCTCTGGAGGCGGAGATAAAAATCTGGTTCTCTCCGGTCTGC 1266 Query 13099 ACTGCGTCCATGAACGCTTCGGCGGCGAAGTAGTAGGTCAGCCCGATCTGGCGCGACTTC 13158 | || |||| ||||| || || | ||| ||| ||| | |||||||||||| || ||| Sbjct 1265 AGGGCATCCACCAACGCCTCCGCCGAGAAATAGCGGGTGAACCCGATCTGGCGGGATTTC 1206 Query 13159 AG 13160 || Sbjct 1205 AG 1204 >seq14711 Length=7958 Score = 86.0 bits (94), Expect = 1e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 13039 CGGAACACTTCGGACTGGGCGCGGCTCGCGGACAGGAAAATCTGGTTGTCCCCGGTCAGC 13098 |||||||| || | |||||| | | ||||| | ||||||||||| || |||||| || Sbjct 1013 CGGAACACCTCCGCCTGGGCTCTGGAGGCGGAGATAAAAATCTGGTTCTCTCCGGTCTGC 1072 Query 13099 ACTGCGTCCATGAACGCTTCGGCGGCGAAGTAGTAGGTCAGCCCGATCTGGCGCGACTTC 13158 | || |||| ||||| || || | ||| ||| ||| | |||||||||||| || ||| Sbjct 1073 AGGGCATCCACCAACGCCTCCGCCGAGAAATAGCGGGTGAACCCGATCTGGCGGGATTTC 1132 Query 13159 AG 13160 || Sbjct 1133 AG 1134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104291030034114