Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq1283 87.8 5e-13 >seq1283 Length=34873 Score = 87.8 bits (96), Expect = 5e-13 Identities = 184/272 (68%), Gaps = 2/272 (1%) Strand=Plus/Minus Query 26930 TCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACCGCCT 26989 ||||||||||| || || || | | ||| ||| || ||||| | || |||| Sbjct 30957 TCAGTGGTGTATCGGTCCTGACCGTCTTTATCCTGCCACTTTCGGGTCTGGAGCTTGCCT 30898 Query 26990 TCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTTGCCG 27049 || || | |||||| |||||| ||||| | || || ||||||||||| ||| Sbjct 30897 TCGATATAAACCTTGGAGCCTTTATTGAGGTACTGCTGGGCAATCTCCGCCAGCTTCCCG 30838 Query 27050 AAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATCTTTC 27109 ||||| || || || |||||||| |||| || | | | ||| ||| |||||| ||| Sbjct 30837 AAGATCACCACCCGATGCCATTCGGTCTTTTCCTGCTGCTGGCCGGTGTTCTTATCCTTC 30778 Query 27110 CACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGC-GCCACCTGACGGCATGTAGCG 27168 || || | ||||| | ||||||||| || || || |||||| | | | || Sbjct 30777 CATGCCTCACTGGTGGCCAGTGAGAGATTGGCCACGGCTGCACCCTGAC-CCGTAAACCG 30719 Query 27169 CACTTCTGGATCGTTGCCTAAATTACCGATTA 27200 || || ||||||| ||| | || ||||||| Sbjct 30718 AACATCCGGATCGTCGCCCAGGTTGCCGATTA 30687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133982893273680