Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq11361 194 1e-44 >seq11361 Length=1230 Score = 194 bits (214), Expect = 1e-44 Identities = 431/638 (68%), Gaps = 23/638 (4%) Strand=Plus/Plus Query 96837 AAAACATGATCAGGTCTGCGTCCTGCTCAATTGCTCCTGATTCACGTAAATCTGAATTTA 96896 ||||||| || | ||| ||||||||||| || || ||||||||||| | || || |||| Sbjct 11 AAAACATAATGACGTCAGCGTCCTGCTCGATGGCGCCTGATTCACGAAGGTCAGAGTTTA 70 Query 96897 CCGGTCGTTTGTCCGCACGCTGTTCAAGCGATCGATTAAGTTGTGACAATGCCACCACCG 96956 | || ||||||| | | ||| ||||| || || || || || |||| ||| | |||| Sbjct 71 CAGGACGTTTGTTTGGTCTCTGCTCAAGAGAACGGTTCAGCTGAGACAGTGCAATAACCG 130 Query 96957 GTACTTGTAATTCCTTCGCCAACGCCTTCAGTGAGCGAGAAATCTCGGCAATTTCCAGCG 97016 |||||| || ||||| || | || ||||| || || |||||||||| |||||| | Sbjct 131 GTACTTCGAACTCCTTGGCAATAGCTTTCAGCGATCGGGAAATCTCGGAAATTTCATTGG 190 Query 97017 TTCGGTTATCTTGC---AGCTCCGGGACGCGCATAAGTTGCAGGTAGTCGATCATAATCA 97073 ||| || || | ||| | |||| |||| || |||||||||||||||||||||| Sbjct 191 TTC--TTCCCTCACCAAAGC-CTGGGATCTGCATCAGCTGCAGGTAGTCGATCATAATCA 247 Query 97074 TGCTCAAACCACCATTTTCTTTATAAACACGACGAGCGCGGGAACGTAGCTCTGTCGGCG 97133 | | | | |||| | ||| | || || ||| | || || || | || | || Sbjct 248 TACCAAGATCACCGTGCTCTCTGACCACCCGGCGAACCCGTGAGCGCATTTCCGATGGGC 307 Query 97134 TCAGGGCGCTTGAGTCATCAATAAAAATATTCTGCTTGTCCAACAGAATAC---CCATTG 97190 | | | || | |||||||||||| | || |||||| ||||| | | | Sbjct 308 TGATGCCGGCCGTGTCATCAATAAACA---GCTTCTTGTC---TTTAATACGTTCAACCG 361 Query 97191 -CGCCAGAAACCCGCGCCCAATCCTCGTCGTTAAGTTGCCCTGTTCGAATACGAGTCTGA 97249 || || | | | | ||| ||||| || | || || || |||||| | |||| Sbjct 362 CCGACA-ACAACTTAGGCCAGTCCTCTTCCTCCAGCTGACCACTTCGAACCTTGGACTGA 420 Query 97250 TCAACGCGTGCAAGAGAAGCCAGTGAGCGCATCATCAGCTGGTGGCTCGGCATCTCAAGG 97309 | | | | || || | || |||||||||| ||| | |||||||||||||| Sbjct 421 TTGATCCTCCCCAGGGATGAAAGCATACGCATCATCAACTGCTCACTCGGCATCTCAAGA 480 Query 97310 CTAAAAACCAATACGGGCTTATC---GTTACGAACTGCGGCATTTTCGACGAGATTCATC 97366 || || |||| || ||| || |||| | | ||| || || || || ||||| Sbjct 481 CTGAAGACCATGACACCCTTCTCGCTGTTAAGCAGAGCG---TTCTCAACCAGGTTCATG 537 Query 97367 GCAAACGTGGTCTTCCCCATAGATGGGCGGGCGGCGACAATGATGAGATCGGACGACTGA 97426 |||||||| ||||| ||||| || || ||||| || |||||||| | |||||| | ||| Sbjct 538 GCAAACGTCGTCTTACCCATGGAAGGACGGGCAGCCACAATGATCATATCGGATGGCTGC 597 Query 97427 AGCCCTGCCGTCTTCTTATTGAGATCGGTAAATCCGGT 97464 | || | ||| | | || ||||| |||| ||||| Sbjct 598 ATACCCGAGGTCATTTCATCCAGATCTTTAAAACCGGT 635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330815304954298