Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capitella_20teleta_20[genbank_20GCA_5F000328365.1_202013-01-25] 20,803 sequences; 333,283,208 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq18747 123 6e-23 seq3888 118 2e-21 seq9036 111 4e-19 >seq18747 Length=106157 Score = 123 bits (136), Expect = 6e-23 Identities = 153/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || |||||||| ||||||||||| || | || | |||||||| | Sbjct 22725 CAAG-TGAAGGGTGGACTCTTTCTGGATGTTGTAGTCACTCAGGGTGCGGCCATCTTCCA 22667 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | |||||||| || | | ||| |||||||| || || | Sbjct 22666 GTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTGGA 22607 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||||| |||| | | ||||||| ||| || ||||| ||||| || |||| Sbjct 22606 TCTTAGCTTTGACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAATGGTCTTGC 22547 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || |||| |||||| Sbjct 22546 CAGTGAGGGTCTTGACAAAGATCTGCAT 22519 Score = 122 bits (134), Expect = 2e-22 Identities = 153/209 (73%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| ||| | || | |||||||| | Sbjct 22497 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCA 22439 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||| ||||| | |||||||| || | | || |||||||| || || | Sbjct 22438 GTTGCTTGCCGGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGA 22379 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| |||| | | ||||||| ||| || ||||| || || || |||| Sbjct 22378 TCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACCTCAAGGGTGATTGTCTTGC 22319 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | ||||| ||||||||||||| ||||||| Sbjct 22318 CGGTGAGGGTCTTCACGAAGATCTGCATT 22290 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || |||||||| ||||||||||| ||| | || | |||||||| | Sbjct 22953 CAAG-TGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCA 22895 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | || ||||| || | | || |||||||| || || | Sbjct 22894 GTTGCTTGCCAGCAAAGATCAATCTTTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGA 22835 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| ||| |||| | | ||||||| ||| || ||||| ||||| || |||| Sbjct 22834 TCTTGGCTTTCACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAATGGTCTTGC 22775 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || |||| |||||| Sbjct 22774 CAGTGAGGGTCTTGACAAAGATCTGCAT 22747 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| ||| | || | |||||||| | Sbjct 23409 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCA 23351 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | |||||||| || | | || |||||||| || || | Sbjct 23350 GTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGA 23291 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| |||| | | ||||||| ||| || ||||| ||||| || |||| Sbjct 23290 TCTTGGCCTTGACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAATGGTCTTGC 23231 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || |||| |||||| Sbjct 23230 CAGTGAGGGTCTTGACAAAGATCTGCAT 23203 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| ||| | || | |||||||| | Sbjct 23181 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCCA 23123 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | |||||||| || | | || |||||||| || || | Sbjct 23122 GTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGA 23063 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| ||| |||| | | |||| || ||| || ||||| ||||| || |||| Sbjct 23062 TCTTGGCTTTCACATTCTCAATGGTGTCCGAGGGCTCAACCTCAAGGGTAATGGTCTTGC 23003 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || |||| |||||| Sbjct 23002 CAGTGAGGGTCTTGACAAAGATCTGCAT 22975 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| || | || | |||||||| | Sbjct 23637 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCATCTTCCA 23579 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | |||||||| || | | || |||||||| || || | Sbjct 23578 GTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGA 23519 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| ||| |||| | | ||||||| ||| || ||||| ||||| || |||| Sbjct 23518 TCTTGGCTTTCACATTCTCAATGGTGTCTGAGGGCTCAACCTCAAGGGTAATGGTCTTGC 23459 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || |||| |||||| Sbjct 23458 CAGTGAGGGTCTTGACAAAGATCTGCAT 23431 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || |||||||| ||||||||||| || | || | |||||||| | Sbjct 24093 CAAG-TGAAGGGTGGACTCTTTCTGGATGTTGTAGTCACTCAGGGTGCGGCCATCTTCCA 24035 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | |||||||| || | | || |||||||| || || | Sbjct 24034 GTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGA 23975 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| ||| |||| | | |||| || ||| || ||||| ||||| || |||| Sbjct 23974 TCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGTCTTGC 23915 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || |||| |||||| Sbjct 23914 CAGTGAGGGTCTTGACAAAGATCTGCAT 23887 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| || | || | |||||||| | Sbjct 23865 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCATCTTCCA 23807 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | |||||||| || | | || |||||||| || || | Sbjct 23806 GTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGA 23747 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| ||| |||| | | |||| || ||| || ||||| ||||| || |||| Sbjct 23746 TCTTGGCTTTCACATTCTCAATGGTGTCCGAGGGCTCAACCTCAAGGGTAATGGTCTTGC 23687 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || |||| |||||| Sbjct 23686 CAGTGAGGGTCTTGACAAAGATCTGCAT 23659 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| || | || | |||||||| | Sbjct 24321 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCATCTTCCA 24263 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | |||||||| || | | || |||||||| || || | Sbjct 24262 GTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGA 24203 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| ||| |||| | | |||| || ||| || ||||| ||||| || |||| Sbjct 24202 TCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGTCTTGC 24143 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || |||| |||||| Sbjct 24142 CAGTGAGGGTCTTGACAAAGATCTGCAT 24115 >seq3888 Length=367485 Score = 118 bits (130), Expect = 2e-21 Identities = 154/210 (73%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| ||| | || | |||||||| | Sbjct 211925 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCA 211867 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || || ||||| | |||||||| || | | ||| |||||||| || || Sbjct 211866 GTTGCTTT--CCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTG 211809 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || || ||| |||||| | ||||||| ||| || ||||| || || || || Sbjct 211808 GATCTTGGCCTTCACATTCTCTATGGTGTCTGAGGGCTCCACCTCAAGGGTGATGGTCTT 211749 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || |||||||| |||| |||||| Sbjct 211748 GCCAGTTAGGGTCTTCACAAAGATCTGCAT 211719 Score = 113 bits (124), Expect = 1e-19 Identities = 153/210 (73%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| ||| | || | |||||||| | Sbjct 211469 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCA 211411 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || || ||||| | |||||||| || | | ||| |||||||| || || Sbjct 211410 GTTGCTTT--CCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTG 211353 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || || ||| |||| | | ||||||| ||| || ||||| || || || || Sbjct 211352 GATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACCTCAAGGGTGATGGTCTT 211293 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || |||||||| |||| |||||| Sbjct 211292 GCCAGTTAGGGTCTTCACAAAGATCTGCAT 211263 Score = 113 bits (124), Expect = 1e-19 Identities = 153/210 (73%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| ||| | || | |||||||| | Sbjct 211697 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCA 211639 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || || ||||| | |||||||| || | | ||| |||||||| || || Sbjct 211638 GTTGCTTT--CCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATGCCTTCCTTGTCCTG 211581 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || || ||| |||| | | ||||||| ||| || ||||| || || || || Sbjct 211580 GATCTTGGCCTTCACATTCTCAATGGTGTCTGAGGGCTCCACCTCAAGGGTGATGGTCTT 211521 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || |||||||| |||| |||||| Sbjct 211520 GCCAGTTAGGGTCTTCACAAAGATCTGCAT 211491 >seq9036 Length=11236 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| ||| | || | |||||||| | Sbjct 10547 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCA 10605 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | |||||||| || | | || |||||||| || || | Sbjct 10606 GTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGA 10665 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| ||| |||| | | |||| || ||| || ||||| ||||| || |||| Sbjct 10666 TCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGTCTTGC 10725 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || |||| |||||| Sbjct 10726 CAGTGAGGGTCTTGACAAAGATCTGCAT 10753 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| ||| | || | |||||||| | Sbjct 10775 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCA 10833 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | |||||||| || | | || |||||||| || || | Sbjct 10834 GTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGA 10893 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| ||| |||| | | |||| || ||| || ||||| ||||| || |||| Sbjct 10894 TCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGTCTTGC 10953 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || |||| |||||| Sbjct 10954 CAGTGAGGGTCTTGACAAAGATCTGCAT 10981 Score = 111 bits (122), Expect = 4e-19 Identities = 150/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || ||||||||||| ||| | || | |||||||| | Sbjct 11003 CAAG-TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGACCATCTTCCA 11061 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| | |||||||| || | | || |||||||| || || | Sbjct 11062 GTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGGA 11121 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||| ||| |||| | | |||| || ||| || ||||| ||||| || |||| Sbjct 11122 TCTTGGCTTTCACATTCTCAATGGTGTCGGAGGGCTCAACCTCAAGGGTAATGGTCTTGC 11181 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| || |||| |||||| Sbjct 11182 CAGTGAGGGTCTTGACAAAGATCTGCAT 11209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153513262406813