Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciona_20intestinalis_20[refseq_20GCF_5F000224145.2_202013-09-17] 1,272 sequences; 115,227,500 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq9 91.5 2e-13 >seq9 Length=6586237 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 164608 ATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGA 164667 ||||| || ||||||||| | |||||||||||||| || ||||||||| | ||| || || Sbjct 3757403 ATTGTAAACGGTCCTGAAATCTTGAACAAATATGTTGGAGAGTCAGAATCGAATATTCGA 3757344 Query 164668 AAGTTGTTTCAGGAGGCTGAAGAAGAACAAAAGAA 164702 |||||||| | | || ||||||||||| || || Sbjct 3757343 AAGTTGTTCGAAGCTGCAGAAGAAGAACAGAAAAA 3757309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595862525635200