Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ciona_20intestinalis_20[refseq_20GCF_5F000224145.2_202013-09-17]
1,272 sequences; 115,227,500 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq2 82.4 9e-11
>seq2
Length=7758925
Score = 82.4 bits (90), Expect = 9e-11
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811
||| |||||| | || || || || | | | |||||||| || |||||||| || || ||
Sbjct 5569742 GTATATGTTACTTGTATAAGGCTCAATAGATTCATTGTTACCAAGGATTTGAGCGGTAGA 5569801
Query 109812 AGCTGTGGGCATGGGAGCCATGAGAAGACTGTT 109844
||||| ||||||||||| || |||||||||||
Sbjct 5569802 TGCTGTTGGCATGGGAGCAATAAGAAGACTGTT 5569834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588966635281600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |