Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciona_20intestinalis_20[refseq_20GCF_5F000224145.2_202013-09-17] 1,272 sequences; 115,227,500 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1231 316 3e-81 seq1182 178 2e-39 seq3 150 2e-31 seq1158 120 4e-22 seq9 113 6e-20 seq10 84.2 3e-11 >seq1231 Length=98070 Score = 316 bits (350), Expect = 3e-81 Identities = 741/1118 (66%), Gaps = 9/1118 (1%) Strand=Plus/Plus Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCT 195685 ||| | ||||| ||||| | ||||| | | |||||||||||| ||||||||| | Sbjct 75579 TTTTCACCCGAGGAAATCAGTGCAATGGTTCTTACTAAGATGAAGGACACTGCGGAAGCA 75638 Query 195686 TTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCA 195745 | | | ||| ||| ||| || || || ||| | || |||||||||||||||| || ||| Sbjct 75639 TACCTCGGTGAAAATGTAAAGGACGCGGTTATAACAGTACCTGCTTACTTCAACGACTCA 75698 Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805 |||||||| || ||||| ||||||| || || || || ||| || ||| | || Sbjct 75699 CAACGACAAGCAACAAAAGACGCTGGCATCATCGCAGGACTGAACGTACTCAGAGTGATA 75758 Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865 || ||||| ||||| || ||| | || || || || || |||||| || | || ||| Sbjct 75759 AACGAACCCACAGCAGCGGCATTGGCGTACGGACTCGATAAGAACTTGGCTGGCGAGAAA 75818 Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATAT---T 195922 || || || || || ||||| || || || || || |||||||| | |||| || Sbjct 75819 AAGGTTTTAATTTTCGATCTTGGCGGCGGAACCTTCGATGTCTCTGTGCTCACCATCGAC 75878 Query 195923 GAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGAT 195982 ||||| || || ||||| | |||||||| || || ||||| || || || || Sbjct 75879 GAAGGATCAATTTTTGAAGTTCTTTCAACTGCTGGGGACACCCATCTTGGCGGAGAGGAC 75938 Query 195983 TTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGAT 196042 |||||| || | | ||||| |||| |||||| ||||| | || || || Sbjct 75939 TTCGATAACCGAATGGTGAAGCATTTCACTGAAGAGTTCAAGCGAAAACACAAAAAGGAC 75998 Query 196043 ATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGA 196102 || || | | ||||| || | | | |||| || ||||| || || || || Sbjct 75999 ATCTCAAAGAGTAACAGGGCAATTAGAAGATTACGGACGGCCTGTGAGCGAGCTAAGCGC 76058 Query 196103 ACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGAC 196162 ||||| | || | || | || ||| | ||||| | | || |||||||| Sbjct 76059 GTCCTCTCAACCTCGACAGAAGCTGCTGTCGAGTTGGATTCTCTATACGAAGGAATTGAT 76118 Query 196163 TTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAG 196222 ||||| | | || | | ||| | || ||||| | ||| ||| | || | Sbjct 76119 TTCTACAGTAAAATCTCAAGAGCAAGATTCGAAGAACTGTGCTCCGATCTCTTCCGTTCC 76178 Query 196223 TGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGAT 196282 ||| | || ||||| ||| ||| || | || || ||| | ||||| | ||| | || Sbjct 76179 TGTCTTGACCCTGTCGAAAAAGCTCTAAGAGATGCTAAGCTAGATAAAACGAAGATCGAC 76238 Query 196283 GAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGC 196342 ||| |||| ||||| |||||||||||| | || |||| | | ||| || | || | Sbjct 76239 GAAGTTGTTCTTGTCGGAGGATCAACCAGGATCCCGAGGGTGCAAAAGTTACTCAGTGAT 76298 Query 196343 TTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGT 196402 ||||| || ||| || | |||||| | |||||||| || ||||||||||| || ||| Sbjct 76299 TTCTTTAACGGAAAAAATCTTAACAAATCAATCAACCCCGACGAAGCAGTTGCCTACGGT 76358 Query 196403 GCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTG 196462 || || || ||||| || | || |||| ||| ||| ||||| | || Sbjct 76359 GCTGCGGTGCAGGCGGCAGTGCTTACAGG------CAACTCCGGCGTGAAAGATGTGTTG 76412 Query 196463 CTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAA 196522 | | || |||||||| |||| |||| |||| ||||| || | | ||||| || Sbjct 76413 TTGGTCGACGTTGCACCTCTATCGTTGGGAATTGAGACAGCCGGCGAGATGATGACAAAG 76472 Query 196523 ATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCC 196582 | | || | ||||||| || || || | ||| || || | ||||| | Sbjct 76473 CTGGTGGAACGAAACACAAGAATCCCACACAATACTTCACAGGTGTTCACCACGTACGCT 76532 Query 196583 GATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGAT 196642 ||||||||||| | || |||||||| || ||||| ||||| | | | || || Sbjct 76533 GATAATCAACCTGCCGTCACAATTCAAGTTTACGAAGGCGAACGAGCACAGACGAAACAT 76592 Query 196643 AACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCA 196702 ||| |||| || ||||| || | | || || || || | ||||| |||||||| ||| Sbjct 76593 AACAATCTGCTCGGAACATTTAACCTCACTGGAATAGCACCAGCACCAAGAGGTGTGCCA 76652 Query 196703 CAGATTAATGTTTGCTTCGATATAGACGCAAATGGAAT 196740 |||| || |||| || || || |||||||||||||| Sbjct 76653 AAGATCAAAGTTTCGTTTGACATCGACGCAAATGGAAT 76690 >seq1182 Length=543332 Score = 178 bits (196), Expect = 2e-39 Identities = 355/518 (69%), Gaps = 6/518 (1%) Strand=Plus/Plus Query 196295 GTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTT-CTTCAATAA 196353 || || || || || |||||||| ||||| ||| | ||| || || || ||||||| Sbjct 526928 GTTGGTGGCTCCACTCGTATTCCCAAGATCCAAAAAATG-TTGAAAGATTTCTTCAATGG 526986 Query 196354 TAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCA 196413 || || || |||||| | |||||||| |||||||| || ||||||||||| |||||||| Sbjct 526987 AAAGGAATTGAACAAATCTATCAACCCAGATGAAGCTGTCGCTTATGGTGCAGCCGTTCA 527046 Query 196414 GGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGT 196473 ||| |||||||| || | | | | | || || |||||||| | | ||||| Sbjct 527047 GGCAGCTATTCTTAGTGGAGATAAATCGGAAGAGGTTCAGGATCTTCTCTTGTTGGATGT 527106 Query 196474 TGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAG 196533 |||||| |||| || ||| |||| || || || || || ||||| | || | || Sbjct 527107 TGCACCTTTATCTCTTGGTATTGAGACCGCTGGAGGAGTGATGACAGCTTTGATCAAGAG 527166 Query 196534 GAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACC 196593 ||||| ||| | || || || | ||| | || | || || || || || ||||| Sbjct 527167 AAACACTACTGTCCCAACCAAACAATCCCAAATATTCACCACTTACTCGGACAACCAACC 527226 Query 196594 AGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTAC 196652 |||||| || ||||| || || || ||||| | | || | ||||| ||| | ||| Sbjct 527227 AGGTGTGTTGATCCAAGTGTACGAGGGTGAACG-TACGATGACCAAGGACAACAACATAC 527285 Query 196653 TTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATG 196712 |||| | ||||| | | || || || ||||||| | || |||||||||||| | | Sbjct 527286 TTGGTAAGTTCGAGCTCTCCGGCATCCCCCCTGCACCTCGTGGAGTTCCACAGATTGAGG 527345 Query 196713 TTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTG 196772 | |||||||| || || || || || | || || | |||| |||||| ||| Sbjct 527346 TGACATTCGATATCGATGCTAACGGTATCTTGAATGTATCTGCTGTTGACAAGAGCACTG 527405 Query 196773 GCAAATCTGAA-AAGATTGTGATTACCAATGACAAGGG 196809 | ||| ||| ||||| || ||||| ||||| || Sbjct 527406 G-AAAGGAGAATAAGATCACAATCACCAACGACAAAGG 527442 Score = 134 bits (148), Expect = 2e-26 Identities = 177/243 (73%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 195608 CACGGTGAGAAGAAACAATTTGCTCCCG-AAGAAATTTCGTCTATGGTGTTGATTAAGAT 195666 || ||||| | ||| | ||| ||||| |||||||| || ||||| | || || Sbjct 525492 CAGGGTGAAACTAAA-ACTTTCTTCCCGGAAGAAATTAGTTCCATGGTTCTTCTTCGAAT 525550 Query 195667 GAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACC 195726 ||| || || || ||| | | | |||||||| | | |||||||| || || ||||| Sbjct 525551 GAAAGAAACCGCTGAAGCATATCTCGGTAAAACAATCACCGATGCAGTGGTTACAGTACC 525610 Query 195727 TGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCT 195786 |||||| |||| ||||||||| |||| || || || || || | | ||| | ||||| Sbjct 525611 TGCTTATTTCAACGATTCACAAAGACAAGCCACCAAAGATGCAGGAACCATTTCTGGTCT 525670 Query 195787 AAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAA 195846 || |||||||||||||||||| ||||| || ||||| ||||| |||||| | ||||| Sbjct 525671 CAATGTTCTTAGAATTATCAATGAGCCAACTGCAGCTGCCATTGCATATGGTTTAGACAA 525730 Query 195847 GAA 195849 || Sbjct 525731 AAA 525733 >seq3 Length=6703989 Score = 150 bits (166), Expect = 2e-31 Identities = 232/328 (71%), Gaps = 10/328 (3%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 || |||||||||||||| || || | | | || | || ||| | ||||| || || Sbjct 5820247 AAAATGAAGGAGACTGCAGAGAGTTACCTTAATCAACCAGTCAAAAACGCAGTAGTAACA 5820188 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || |||||||| | |||||| ||||| || || |||||||| || | ||| | Sbjct 5820187 GTTCCGGCTTACTTTAATGATTCTCAACGTCAAGCTACAAAGGATGCCGGCCAGATTTCT 5820128 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || | || ||| | ||||||||||||| ||||||||||| |||||||||| || Sbjct 5820127 GGGTTGAATGTTCTACGTGTTATCAATGAACCTACAGCGGCTGCCCTTGCTTATGGCATG 5820068 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 || ||| || |||||||||| | || | | || || ||||||||||| || Sbjct 5820067 GATAAG-TCA-----GAAGATAAAATTATAGCCGTGTACGACCTTGGTGGTGGTACCTTC 5820014 Query 195902 GATGTCTCACTTCTCAATATT--GAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 ||| | ||| | || | ||| |||| ||| | || ||||||||| | || ||| | Sbjct 5820013 GATATTTCATTGCTTGAAATTCAGAAG--GGTGTGTTTGAAGTAAAGTCAACAAATGGAG 5819956 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||||| ||| || ||||||||||| || Sbjct 5819955 ATACTCTTCTTGGAGGTGAAGATTTTGA 5819928 >seq1158 Length=770266 Score = 120 bits (132), Expect = 4e-22 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| |||||||| ||||||||||| ||||| || |||||||| ||||||||||||||||| Sbjct 341534 AGGAATTCCACCAGATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGATGGACG 341475 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 ||| || ||||||||| | || || ||||||||||| ||| | ||||| Sbjct 341474 TACACTGAGCGATTACAACATCCAGAAAGAGTCTACTCTTCACTTGGTTCT 341424 Score = 114 bits (126), Expect = 2e-20 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| || || || ||||||||||| ||||| || |||||||| ||||||||||||||||| Sbjct 341175 AGGAATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGATGGACG 341116 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 ||| || ||||||||| | ||||| ||||||||||| ||| | ||||| Sbjct 341115 TACACTGAGCGATTACAACATCCAAAAAGAGTCTACTCTTCACTTGGTTCT 341065 Score = 111 bits (122), Expect = 2e-19 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| || || || ||||||||||| ||||| ||||||||||| ||||||||||| ||||| Sbjct 337456 AGGAATCCCCCCAGATCAGCAACGTCTTATCTTTGCTGGTAAGCAGCTTGAAGACGGACG 337397 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || || ||||||||| | || |||||||||||||| ||| | ||||| Sbjct 337396 CACACTGAGCGATTACAACATCCAGAAGGAGTCTACTCTTCACTTGGTTCT 337346 Score = 111 bits (122), Expect = 2e-19 Identities = 105/133 (79%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| || || || ||||||||||| ||||| || |||||||| ||||||||||| ||||| Sbjct 338690 AGGAATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGACGGACG 338631 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCG 172082 ||| || ||||||||| | ||||| ||||||||||| ||| | ||||| | ||| | Sbjct 338630 TACACTGAGCGATTACAACATCCAAAAAGAGTCTACTCTTCACTTGGTTCTTCGTCTTAG 338571 Query 172083 GGGTGG--TGCAA 172093 || || ||||| Sbjct 338570 AGGAGGAATGCAA 338558 Score = 111 bits (122), Expect = 2e-19 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| || ||||| ||||||||||| ||||| || |||||||| ||||||||||||||||| Sbjct 341978 AGGAATCCCACCAGATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGATGGACG 341919 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || || ||||||||| | || || ||||||||||| ||| | ||||| Sbjct 341918 CACACTGAGCGATTACAACATCCAGAAAGAGTCTACTCTTCACTTGGTTCT 341868 Score = 107 bits (118), Expect = 3e-18 Identities = 104/133 (78%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| || || || ||||||||||| ||||| || |||||||| ||||||||||| ||||| Sbjct 338247 AGGAATCCCTCCAGATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGACGGACG 338188 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCG 172082 || || ||||||||| | ||||| ||||||||||| ||| | ||||| | ||| | Sbjct 338187 CACACTGAGCGATTACAACATCCAAAAAGAGTCTACTCTTCACTTGGTTCTTCGTCTTAG 338128 Query 172083 GGGTGG--TGCAA 172093 || || ||||| Sbjct 338127 AGGAGGAATGCAA 338115 Score = 105 bits (116), Expect = 9e-18 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| || || || ||||||||||| ||||| || |||||||| ||||||||||| ||||| Sbjct 337814 AGGAATCCCTCCAGATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGACGGACG 337755 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || || ||||||||| | ||||| ||||||||||| ||| | ||||| Sbjct 337754 CACACTGAGCGATTACAACATCCAAAAAGAGTCTACTCTTCACTTGGTTCT 337704 Score = 102 bits (112), Expect = 1e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | ||||||||||| ||||| || || |||||| | || Sbjct 337687 ATGCAAATCTTTGTCAAAACTTTGACTGGAAAAACCATCACTCTTGAAGTTGAGGCATCT 337628 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||| | || || || ||||||||||||||||||| || ||||| Sbjct 337627 GACTCTATTGACAATGTCAAAGCCAAGATTCAAGACAAAGAAGG 337584 Score = 102 bits (112), Expect = 1e-16 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| || || || ||||||||||| ||||| || |||||||| ||||||||||| ||||| Sbjct 340817 AGGAATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGACGGACG 340758 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || || ||||||||| | || || ||||||||||| ||| | ||||| Sbjct 340757 CACACTGAGCGATTACAACATCCAGAAAGAGTCTACTCTTCACTTAGTTCT 340707 Score = 96.9 bits (106), Expect = 5e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| || || || ||||||||||| ||||| || |||||||| ||||||||||| ||||| Sbjct 339215 AGGAATCCCCCCAGATCAGCAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGACGGACG 339156 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || || ||||||||| | || || ||||| ||||| ||| | ||||| Sbjct 339155 CACACTGAGCGATTACAACATCCAGAAAGAGTCCACTCTTCACTTGGTTCT 339105 Score = 96.9 bits (106), Expect = 5e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| ||||| || ||||| ||||| ||||| || |||||||| ||||||||||| ||||| Sbjct 340371 AGGAATTCCCCCAGATCAACAACGTCTTATCTTCGCTGGTAAGCAGCTTGAAGACGGACG 340312 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || || ||||||||| | || || ||||| ||||| ||| | ||||| Sbjct 340311 CACACTGAGCGATTACAACATCCAGAAAGAGTCCACTCTTCACTTGGTTCT 340261 Score = 93.3 bits (102), Expect = 6e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| ||||| ||||| | |||||||| || ||||| || || |||||| | || Sbjct 338120 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATCACTCTTGAAGTTGAGGCATCT 338061 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||| | || || ||| ||||||||||||| ||||| || ||||| Sbjct 338060 GACTCTATTGACAACGTCAAAGCCAAGATCCAAGACAAAGAAGG 338017 Score = 93.3 bits (102), Expect = 6e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| ||||| ||||| | |||||||| || ||||| || || |||||| | || Sbjct 338563 ATGCAAATTTTTGTCAAAACTTTGACTGGAAAGACCATCACTCTTGAAGTTGAGGCATCT 338504 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||| | || || ||| ||||||||||||| ||||| || ||||| Sbjct 338503 GACTCTATTGACAACGTCAAAGCCAAGATCCAAGACAAAGAAGG 338460 Score = 93.3 bits (102), Expect = 6e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | ||||||||||| ||||| || || |||||| | || Sbjct 339088 ATGCAAATCTTTGTCAAAACTTTGACTGGAAAAACCATCACTCTTGAAGTTGAGGCATCT 339029 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || | || || || ||||||||||||| ||||| || ||||| Sbjct 339028 GATTCTATTGACAATGTCAAAGCCAAGATCCAAGACAAAGAAGG 338985 Score = 93.3 bits (102), Expect = 6e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | || |||||||| |||||||| || |||||| | || Sbjct 340244 ATGCAAATCTTTGTCAAAACTTTGACAGGAAAAACCATCACCCTTGAAGTTGAGGCATCT 340185 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || | || || || ||||||||||||| ||||| || ||||| Sbjct 340184 GATTCCATTGACAATGTCAAAGCCAAGATCCAAGACAAAGAAGG 340141 Score = 93.3 bits (102), Expect = 6e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | || ||||| |||||||| || || |||||| | || Sbjct 341048 ATGCAAATCTTTGTCAAAACTTTGACAGGAAAGACTATCACTCTTGAAGTTGAGGCTTCT 340989 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || | || || ||| ||||||| ||||||||||| || ||||| Sbjct 340988 GATTCTATTGACAACGTCAAAGCTAAGATTCAAGACAAAGAAGG 340945 Score = 93.3 bits (102), Expect = 6e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | || ||||| |||||||| || || |||||| | || Sbjct 341407 ATGCAAATCTTTGTCAAAACTTTGACAGGAAAGACTATCACTCTTGAAGTTGAGGCTTCT 341348 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || | || || ||| ||||||| ||||||||||| || ||||| Sbjct 341347 GATTCTATTGACAACGTCAAAGCTAAGATTCAAGACAAAGAAGG 341304 Score = 93.3 bits (102), Expect = 6e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | || ||||| || ||||| || || |||||| | || Sbjct 341851 ATGCAAATCTTTGTCAAAACTTTGACAGGAAAGACCATCACTCTTGAAGTTGAGGCATCT 341792 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||| | || || ||| ||||||||||||| ||||| || ||||| Sbjct 341791 GACTCTATTGACAACGTCAAAGCCAAGATCCAAGACAAAGAAGG 341748 Score = 89.7 bits (98), Expect = 7e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | |||||||| || ||||| || || |||||| | || Sbjct 340690 ATGCAAATCTTTGTCAAAACTTTGACTGGAAAGACCATCACTCTTGAAGTTGAGGCATCT 340631 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||| | || || ||| |||| || ||||| ||||| || ||||| Sbjct 340630 GACTCTATTGACAACGTCAAGGCTAAGATCCAAGACAAAGAAGG 340587 >seq9 Length=6586237 Score = 113 bits (124), Expect = 6e-20 Identities = 140/189 (74%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCT 195685 |||||| |||||||||| | ||||| ||| || |||||||| | ||| ||| | Sbjct 5101982 TTTGCTGCCGAAGAAATCAGTGCCATGGTTTTGGGCAAAATGAAGGAAATTGCTGAAGCG 5101923 Query 195686 TTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCA 195745 | | || |||||||||| | |||| || || ||||| ||||||||||| | |||| || Sbjct 5101922 TATCTTGGCAAAACTGTGACACATGCTGTGGTAACTGTCCCTGCTTACTTTAATGATGCA 5101863 Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTC-TTAGAATTAT 195804 || || || || ||||| |||| || |||||| || |||| |||| | ||||| || Sbjct 5101862 CAGAGAACTGCAACCAAGGATGCTGGTGTTATTGCAGGATTAAA-TGTCATGAGAATCAT 5101804 Query 195805 CAATGAACC 195813 |||||||| Sbjct 5101803 TAATGAACC 5101795 >seq10 Length=4880875 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 ||| ||||| || ||||| ||| || | || || ||||| || || |||||||||||||| Sbjct 829457 AGGAATTCCTCCTGATCAACAAAGATTGATCTTCGCTGGCAAGCAACTTGAAGATGGACG 829516 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 || | |||||||||| | || || || || ||||| |||||||| || || Sbjct 829517 AACTTTGAGTGATTACAACATCCAGAAAGAATCCACTCTTCACCTTGTGCTTAG 829570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657851939987840