Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciona_20savignyi_20[genbank_20GCA_5F000149265.1_202004-02-25] 34,009 sequences; 587,352,817 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq771 87.8 2e-12 >seq771 Length=730856 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 145753 CCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACC 145812 || |||| ||||| | ||||||||| || | |||||||| || || ||||| || ||| Sbjct 277857 CCTGTGACATGGGCAATCATGTAGGTAAGTAATGAGTAGCTTGCAATATTGAATGGAACC 277916 Query 145813 CCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACG 145872 ||||||||||| || | ||||| |||||||| || || || || || || ||| Sbjct 277917 CCCAGCCCCATATCAGCAGAGCGTTGGTACAGTTGACAAGATAGTTCTCCATTGCATACG 277976 Query 145873 TAGAACTG 145880 |||||||| Sbjct 277977 TAGAACTG 277984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589825950976360