Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciona_20savignyi_20[genbank_20GCA_5F000149265.1_202004-02-25] 34,009 sequences; 587,352,817 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq771 102 7e-17 >seq771 Length=730856 Score = 102 bits (112), Expect = 7e-17 Identities = 101/128 (79%), Gaps = 2/128 (2%) Strand=Plus/Minus Query 20431 CAATTTTACGT-TGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATAT 20489 || || ||||| ||| ||| ||| | || |||||| |||| ||||| || |||||||| Sbjct 277984 CAGTTCTACGTATGC-AATGGAGAACTATCTTGTCAACTGTACCAACGCTCTGCTGATAT 277926 Query 20490 GGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACA 20549 ||| ||||| ||||| |||||||||||||| || | | ||||| || |||||||| || Sbjct 277925 GGGGCTGGGGGTTCCATTCAATATTGCAAGCTACTCATTACTTACCTACATGATTGCCCA 277866 Query 20550 TGTTACAG 20557 ||| |||| Sbjct 277865 TGTCACAG 277858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399018544344505