Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciona_20savignyi_20[genbank_20GCA_5F000149265.1_202004-02-25] 34,009 sequences; 587,352,817 total letters Query= NC_009542.2 Length=33985 Score E Sequences producing significant alignments: (Bits) Value seq27196 102 2e-17 >seq27196 Length=754 Score = 102 bits (112), Expect = 2e-17 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 663 CGGGTTGAGACGCACCGCATCTTCCAGGTGGTCGGGGGCGAAGTGGGCATAGCGCATCGT 722 |||||| | || | ||| || | | |||| ||| | || | ||| || | ||| || Sbjct 602 CGGGTTCAAACTGATCGCTTCCTGAAAATGGTTCGGGTCAAACTTGGCGTATCTCATGGT 543 Query 723 CATCTTGATGTCGGTGTGGCCGAGGATGCGCTGTAGCACCAGGATGTTGCCGCCGTTCAT 782 ||| || || | ||| | ||| || || || || || | |||||||||||| ||||| Sbjct 542 CATGGAAATATCCGCGTGTCTGAGTATCCGTTGCAGTACGATGATGTTGCCGCCTTTCAT 483 Query 783 CATGAAGTGACTGGCGAAGGTATGGCGCAGAACGTGGGTGCTCTGGCCT 831 ||| |||||||||||||| |||||||||| || || ||||||||||| Sbjct 482 CATAAAGTGACTGGCGAACGTATGGCGCAAGACATGACTGCTCTGGCCT 434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108586528866126