Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciona_20savignyi_20[genbank_20GCA_5F000149265.1_202004-02-25] 34,009 sequences; 587,352,817 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1750 154 1e-31 seq603 154 1e-31 seq401 154 1e-31 seq608 147 2e-29 seq36 147 2e-29 seq621 138 9e-27 seq33599 111 1e-18 seq1782 111 1e-18 seq430 111 1e-18 seq1148 89.7 4e-12 seq765 89.7 4e-12 seq211 89.7 4e-12 >seq1750 Length=1123793 Score = 154 bits (170), Expect = 1e-31 Identities = 331/490 (68%), Gaps = 10/490 (2%) Strand=Plus/Minus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT--AA 552171 ||||| || || | ||||| || || |||||||| || || || | | | || || Sbjct 222117 CATGACATCGTATTGGTTGGAGGTTCGACAAGAATCCCCAAGATCCAAAAGCTTTTGCAA 222058 Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 | | | |||||||| || || | || || | || || |||||||||||||| | Sbjct 222057 GATTTC--TTCAATGGAAAGGAACTCAACAAATCCATCAACCCTGATGAGGCTGTTGCTT 222000 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG--ACAAA-CTGATGAAAAACTACAAA 552288 | || || || | ||||| || || ||| ||| | ||| |||| || | ||| Sbjct 221999 ACGGAGCTGCTGTACAAGCTGCAATCCTTAGTGGTGATAAATCTGAGGAGG---TTCAAG 221943 Query 552289 ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTA 552348 || || | | | |||||| |||| || ||||||||| | || || | |||||| | | Sbjct 221942 ATCTTCTTTTGCTTGATGTTGCTCCACTCTCTCTTGGTATCGAGACCGCTGGAGGAGTGA 221883 Query 552349 TGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTA 552408 ||||| | | ||| | || || || ||| | || || |||||| | || | | Sbjct 221882 TGACTTCTTTGATCAAGAGGAACACCACTGTCCCAACAAAGCAATCTCAGATCTTCACGA 221823 Query 552409 CGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCA 552468 | || || || || ||| ||| ||| |||||| ||||||| || ||| | | | | Sbjct 221822 CATACTCTGACAACCAACCTGGTGTGCTCATTCAAGTTTTTGAGGGTGAACGTACCATGA 221763 Query 552469 CTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTG 552528 | ||||| || || | ||||||| ||| | | || || || ||||| || |||| Sbjct 221762 CGAAAGACAACAACCTTCTTGGTAAATTTGAACTTTCTGGAATCCCACCTGCACCACGTG 221703 Query 552529 GAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTG 552588 |||| || || |||||||| || || || || ||||||||||| || ||||||||| ||| Sbjct 221702 GAGTGCCCCAGATTGAAGTCACATTTGACATTGATGCCAATGGCATCTTGAATGTGTCTG 221643 Query 552589 CTTGTGATAA 552598 || ||||| Sbjct 221642 CTGTCGATAA 221633 Score = 100 bits (110), Expect = 2e-15 Identities = 104/135 (77%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 361699 TCCAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAG 361758 ||||| ||||||||| | || ||| ||||||||||| ||||| ||| || ||| ||||| Sbjct 222881 TCCAA-ACCATAAGCAATTGCAGCTGCTGTTGGTTCATTAATAATTCGAAGAACGTTGAG 222939 Query 361759 TCCCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGG 361818 ||| | || || ||||| || |||||||| |||| ||| |||||||| || || Sbjct 222940 TCCAGAAATAGTTCCGGCATCCTTTGTTGCTTGACGCTGTGAATCGTTAAAATAGGCGGG 222999 Query 361819 AACAGTAATCACTGC 361833 |||||||| ||||| Sbjct 223000 AACAGTAACAACTGC 223014 Score = 100 bits (110), Expect = 2e-15 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||||||||| || ||||||||||||||||| || ||| |||||| ||||||| Sbjct 223658 GTCGAAATTATTGCGAACGATCAAGGTAACAGAACCACACCAAGTTATGTAGCTTTCACT 223599 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG 550151 || | ||||| ||| |||| ||||| |||||| |||||| Sbjct 223598 GACAGTGAACGATTAATTGGAGATGCTGCAAAAAATCAAG 223559 >seq603 Length=237505 Score = 154 bits (170), Expect = 1e-31 Identities = 331/490 (68%), Gaps = 10/490 (2%) Strand=Plus/Plus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT--AA 552171 ||||| ||||| | ||||| || || |||||||| || || || | | | || || Sbjct 52919 CATGACATTGTATTGGTTGGAGGTTCGACAAGAATCCCCAAGATCCAAAAGCTTTTGCAA 52978 Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 | | | |||||||| || || | || || | || || |||||||||||||| | Sbjct 52979 GATTTC--TTCAATGGAAAGGAACTCAACAAATCCATCAACCCTGATGAGGCTGTTGCTT 53036 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG--ACAAA-CTGATGAAAAACTACAAA 552288 | || || || | ||||| || || ||| ||| | ||| |||| || | ||| Sbjct 53037 ACGGAGCTGCTGTACAAGCTGCAATCCTTAGTGGTGATAAATCTGAGGAGG---TTCAAG 53093 Query 552289 ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTA 552348 || || | | | |||||| |||| || ||||||||| | || || | |||||| | | Sbjct 53094 ATCTTCTTTTGCTTGATGTTGCTCCACTCTCTCTTGGTATCGAGACCGCTGGAGGAGTGA 53153 Query 552349 TGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTA 552408 ||||| | | ||| | || || || ||| | || || |||||| | || ||| Sbjct 53154 TGACTTCTTTGATCAAGAGGAACACCACTGTCCCAACAAAGCAATCTCAGATCTTCACTA 53213 Query 552409 CGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCA 552468 | || || || || ||| ||| ||| |||||| | ||||| || ||| | | | | Sbjct 53214 CATACTCTGACAACCAACCTGGTGTGCTCATTCAAGTGTTTGAGGGTGAACGTACCATGA 53273 Query 552469 CTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTG 552528 | ||||| || || | ||||||| ||| | | || || || || || || |||| Sbjct 53274 CGAAAGACAACAACCTTCTTGGTAAATTTGAACTTTCTGGAATCCCACCAGCACCACGTG 53333 Query 552529 GAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTG 552588 |||| || || |||||||| || || || || ||||||||||| || ||||||||| ||| Sbjct 53334 GAGTGCCCCAGATTGAAGTCACATTTGACATTGATGCCAATGGCATCTTGAATGTGTCTG 53393 Query 552589 CTTGTGATAA 552598 || ||||| Sbjct 53394 CTGTCGATAA 53403 Score = 125 bits (138), Expect = 6e-23 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 || || |||||||| | ||||| || || |||||||| || ||||| ||||||||||| Sbjct 52003 GTCACTGATGCAGTTGTTACTGTCCCCGCCTATTTTAACGATTCACAGCGTCAAGCTACA 52062 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 || ||||| ||| |||| ||||||| || |||||||| ||||| |||||||| || || Sbjct 52063 AAGGATGCCGGAACTATTTCTGGACTCAACGTTCTTCGAATTATTAATGAACCAACAGCA 52122 Query 550511 GCTGCACTTGCATATGG 550527 ||||| |||| ||||| Sbjct 52123 GCTGCCATTGCTTATGG 52139 Score = 102 bits (112), Expect = 7e-16 Identities = 104/133 (78%), Gaps = 6/133 (5%) Strand=Plus/Plus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||||||||| || ||||||||||||||||| || ||| |||||| ||||||| Sbjct 51398 GTCGAAATTATTGCGAACGATCAAGGTAACAGAACCACACCAAGTTATGTAGCTTTCACT 51457 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAA---GCCACTGGTAATCCTACC 550168 || | ||||| ||| |||| ||||| |||||| ||||| |||| || || || ||| Sbjct 51458 GACAGTGAACGATTAATTGGAGATGCTGCAAAAAATCAAGTTGCCA-TG--AACCCAACC 51514 Query 550169 AATACTATTTTTG 550181 || || |||||| Sbjct 51515 AACACGGTTTTTG 51527 Score = 91.5 bits (100), Expect = 1e-12 Identities = 102/135 (76%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 361699 TCCAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAG 361758 ||||| ||||||||| | | ||| ||||||||||| ||||| ||| || ||| ||||| Sbjct 52145 TCCAA-ACCATAAGCAATGGCAGCTGCTGTTGGTTCATTAATAATTCGAAGAACGTTGAG 52087 Query 361759 TCCCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGG 361818 ||| | || || ||||| || |||||||| |||| ||| |||||||| || || Sbjct 52086 TCCAGAAATAGTTCCGGCATCCTTTGTAGCTTGACGCTGTGAATCGTTAAAATAGGCGGG 52027 Query 361819 AACAGTAATCACTGC 361833 ||||||| ||||| Sbjct 52026 GACAGTAACAACTGC 52012 >seq401 Length=1118472 Score = 154 bits (170), Expect = 1e-31 Identities = 331/490 (68%), Gaps = 10/490 (2%) Strand=Plus/Plus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT--AA 552171 ||||| || || | ||||| || || |||||||| || || || | | | || || Sbjct 985998 CATGACATCGTATTGGTTGGAGGTTCGACAAGAATCCCCAAGATCCAAAAGCTTTTGCAA 986057 Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 | | | |||||||| || || | || || | || || |||||||||||||| | Sbjct 986058 GATTTC--TTCAATGGAAAGGAACTCAACAAATCCATCAACCCTGATGAGGCTGTTGCTT 986115 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG--ACAAA-CTGATGAAAAACTACAAA 552288 | || || || | ||||| || || ||| ||| | ||| |||| || | ||| Sbjct 986116 ACGGAGCTGCTGTACAAGCTGCAATCCTTAGTGGTGATAAATCTGAGGAGG---TTCAAG 986172 Query 552289 ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTA 552348 || || | | | |||||| |||| || ||||||||| | || || | |||||| | | Sbjct 986173 ATCTTCTTTTGCTTGATGTTGCTCCACTCTCTCTTGGTATCGAGACCGCTGGAGGAGTGA 986232 Query 552349 TGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTA 552408 ||||| | | ||| | || || || ||| | || || |||||| | || | | Sbjct 986233 TGACTTCTTTGATCAAGAGGAACACCACTGTCCCAACAAAGCAATCTCAGATCTTCACGA 986292 Query 552409 CGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCA 552468 | || || || || ||| ||| ||| |||||| ||||||| || ||| | | | | Sbjct 986293 CATACTCTGACAACCAACCTGGTGTGCTCATTCAAGTTTTTGAGGGTGAACGTACCATGA 986352 Query 552469 CTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTG 552528 | ||||| || || | ||||||| ||| | | || || || ||||| || |||| Sbjct 986353 CGAAAGACAACAACCTTCTTGGTAAATTTGAACTTTCTGGAATCCCACCTGCACCACGTG 986412 Query 552529 GAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTG 552588 |||| || || |||||||| || || || || ||||||||||| || ||||||||| ||| Sbjct 986413 GAGTGCCCCAGATTGAAGTCACATTTGACATTGATGCCAATGGCATCTTGAATGTGTCTG 986472 Query 552589 CTTGTGATAA 552598 || ||||| Sbjct 986473 CTGTCGATAA 986482 Score = 100 bits (110), Expect = 2e-15 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||||||||| || ||||||||||||||||| || ||| |||||| ||||||| Sbjct 984457 GTCGAAATTATTGCGAACGATCAAGGTAACAGAACCACACCAAGTTATGTAGCTTTCACT 984516 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG 550151 || | ||||| ||| |||| ||||| |||||| |||||| Sbjct 984517 GACAGTGAACGATTAATTGGAGATGCTGCAAAAAATCAAG 984556 Score = 100 bits (110), Expect = 2e-15 Identities = 104/135 (77%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 361699 TCCAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAG 361758 ||||| ||||||||| | || ||| ||||||||||| ||||| ||| || ||| ||||| Sbjct 985234 TCCAA-ACCATAAGCAATTGCAGCTGCTGTTGGTTCATTAATAATTCGAAGAACGTTGAG 985176 Query 361759 TCCCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGG 361818 ||| | || || ||||| || |||||||| |||| ||| |||||||| || || Sbjct 985175 TCCAGAAATAGTTCCGGCATCCTTTGTTGCTTGACGCTGTGAATCGTTAAAATAGGCGGG 985116 Query 361819 AACAGTAATCACTGC 361833 |||||||| ||||| Sbjct 985115 AACAGTAACAACTGC 985101 >seq608 Length=1501776 Score = 147 bits (162), Expect = 2e-29 Identities = 264/383 (69%), Gaps = 22/383 (6%) Strand=Plus/Plus Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265 ||| ||||| ||||| || |||||| || || |||||||||| || | ||||| | || Sbjct 1399771 TGTAAATCCTGATGAAGCGGTTGCCATGGGAGCTGCAATTCAAGGAGGTGTTCTTGCAGG 1399830 Query 552266 ACA---AACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322 | | |||||| | | |||| | |||| |||||||||| || || || Sbjct 1399831 AAACGTAACTGACGTA---CTAC---------TGCTTG---ATGTTACTCCCCTTTCACT 1399875 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 ||| | |||||| | || ||| || | ||||| |||||| ||||||| |||||||| Sbjct 1399876 CGGTATTGAAACACTCGGTGGTGTTTTCACTAAACTTATCACACGAAATACCACTATTCC 1399935 Query 552383 TTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCA 552442 || ||| || || ||| || ||||| |||||| ||| |||| | Sbjct 1399936 GACAAAGAAAAGTCAAGTGTTTAGCACTGCAGCAGATGGCCAAACTCAAGTTGAAATTAA 1399995 Query 552443 AATTTTTGAAGGAGAAAGAAAATT--CACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500 | || | |||||||| || || | |||| ||||| || || ||| ||| | Sbjct 1399996 AGTTCATCAAGGAGAACGAGAAATGGCACTC--GATAACAAAATGCTGGGTCAGTTTCAA 1400053 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 || | ||||| |||||||||||||||||||| || || ||||||||||||| ||||| Sbjct 1400054 TTGGTCGGTATCCCTCCTGCTCCTCGTGGAGTTCCTCAGGTTGAAGTTACTTTTGATATT 1400113 Query 552561 GATGCCAATGGAATTTTGAATGT 552583 ||||| || || ||| | ||||| Sbjct 1400114 GATGCGAACGGCATTGTCAATGT 1400136 Score = 116 bits (128), Expect = 3e-20 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 550384 TCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCA 550443 |||| ||||| | ||||||| | || ||||| || || |||||||| |||||||| || Sbjct 1399090 TCAACCAGTTAAGAATGCAGTTGTTACAGTACCTGCTTACTTTAATGATTCACAACGACA 1399149 Query 550444 AGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 ||||||||||||||| || | || |||| || || || |||||| | || ||||| || Sbjct 1399150 AGCTACTAAAGATGCGGGTCAAATATCTGGTCTAAACGTACTTCGTGTAATTAATGAGCC 1399209 Query 550504 TACTGCTGCTGCACTTGCATATGG 550527 ||||| || || ||||| ||||| Sbjct 1399210 AACTGCAGCCGCCCTTGCTTATGG 1399233 >seq36 Length=6019272 Score = 147 bits (162), Expect = 2e-29 Identities = 264/383 (69%), Gaps = 22/383 (6%) Strand=Plus/Plus Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265 ||| ||||| ||||| || |||||| || || |||||||||| || | ||||| | || Sbjct 1416626 TGTAAATCCTGATGAAGCGGTTGCCATGGGAGCTGCAATTCAAGGAGGTGTTCTTGCAGG 1416685 Query 552266 ACA---AACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322 | | |||||| | | |||| | |||| |||||||||| || || || Sbjct 1416686 AAACGTAACTGACGTA---CTAC---------TGCTTG---ATGTTACTCCCCTTTCACT 1416730 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 ||| | |||||| | || ||| || | ||||| |||||| ||||||| |||||||| Sbjct 1416731 CGGTATTGAAACACTCGGTGGTGTTTTCACTAAACTTATCACACGAAATACCACTATTCC 1416790 Query 552383 TTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCA 552442 || ||| || || ||| || ||||| |||||| ||| |||| | Sbjct 1416791 GACAAAGAAAAGTCAAGTGTTTAGCACTGCAGCAGATGGCCAAACTCAAGTTGAAATTAA 1416850 Query 552443 AATTTTTGAAGGAGAAAGAAAATT--CACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500 | || | |||||||| || || | |||| ||||| || || ||| ||| | Sbjct 1416851 AGTTCATCAAGGAGAACGAGAAATGGCACTC--GATAACAAAATGCTGGGTCAGTTTCAA 1416908 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 || | ||||| |||||||||||||||||||| || || ||||||||||||| ||||| Sbjct 1416909 TTGGTCGGTATCCCTCCTGCTCCTCGTGGAGTTCCTCAGGTTGAAGTTACTTTTGATATT 1416968 Query 552561 GATGCCAATGGAATTTTGAATGT 552583 ||||| || || ||| | ||||| Sbjct 1416969 GATGCGAACGGCATTGTCAATGT 1416991 Score = 116 bits (128), Expect = 3e-20 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 550384 TCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCA 550443 |||| ||||| | ||||||| | || ||||| || || |||||||| |||||||| || Sbjct 1415945 TCAACCAGTTAAGAATGCAGTTGTTACAGTACCTGCTTACTTTAATGATTCACAACGACA 1416004 Query 550444 AGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 ||||||||||||||| || | || |||| || || || |||||| | || ||||| || Sbjct 1416005 AGCTACTAAAGATGCGGGTCAAATATCTGGTCTAAACGTACTTCGTGTAATTAATGAGCC 1416064 Query 550504 TACTGCTGCTGCACTTGCATATGG 550527 ||||| || || ||||| ||||| Sbjct 1416065 AACTGCAGCCGCCCTTGCTTATGG 1416088 >seq621 Length=4757495 Score = 138 bits (152), Expect = 9e-27 Identities = 249/365 (68%), Gaps = 22/365 (6%) Strand=Plus/Plus Query 552206 TGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG 552265 ||| ||||| ||||| || |||||| || || |||||||||| || | ||||| | || Sbjct 966886 TGTAAATCCTGATGAAGCGGTTGCCATGGGAGCTGCAATTCAAGGAGGTGTTCTTGCAGG 966945 Query 552266 ACA---AACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322 | | |||||| | | ||||| | ||||||||||| || || || Sbjct 966946 AAACGTAACTGACG---------------TGTTACTTCTTGATGTTACTCCCCTTTCACT 966990 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 ||| | |||||| | || ||| || | ||||| |||||| ||||||| |||||||| Sbjct 966991 CGGTATTGAAACACTCGGTGGTGTTTTCACTAAACTTATCACACGAAATACCACTATTCC 967050 Query 552383 TTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCA 552442 || ||| || || ||| || ||||| |||||| ||| |||| | Sbjct 967051 AACAAAGAAAAGTCAAGTGTTTAGCACTGCAGCAGATGGACAAACTCAAGTTGAAATTAA 967110 Query 552443 AATTTTTGAAGGAGAAAGAAAATT--CACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500 | || | |||||||| || || | |||| ||||| || || ||| ||| | Sbjct 967111 AGTTCATCAAGGAGAACGAGAAATGGCACTC--GATAACAAAATGCTGGGTCAGTTTCAA 967168 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 || | ||||| |||||||||||||||||||| || || ||||||||||||| ||||| Sbjct 967169 TTGGTCGGTATCCCTCCTGCTCCTCGTGGAGTTCCTCAGGTTGAAGTTACTTTTGATATT 967228 Query 552561 GATGC 552565 ||||| Sbjct 967229 GATGC 967233 Score = 111 bits (122), Expect = 1e-18 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 550384 TCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCA 550443 |||| ||| | | ||||||| | || ||||| || || |||||||| |||||||| || Sbjct 966205 TCAACCAGTAAAGAATGCAGTTGTTACAGTACCTGCTTACTTTAATGATTCACAACGACA 966264 Query 550444 AGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 ||||||||||||||| || | || |||| || || || |||||| | || ||||| || Sbjct 966265 AGCTACTAAAGATGCAGGTCAAATATCTGGTCTAAACGTACTTCGTGTAATTAATGAGCC 966324 Query 550504 TACTGCTGCTGCACTTGCATATGG 550527 ||||| || || ||||| ||||| Sbjct 966325 CACTGCAGCCGCCCTTGCTTATGG 966348 >seq33599 Length=1166 Score = 111 bits (122), Expect = 1e-18 Identities = 426/667 (64%), Gaps = 8/667 (1%) Strand=Plus/Plus Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972 || ||||| || ||||| || ||| ||||||| | || || | || | || | Sbjct 278 ACGGCTTGTGAGAGAGCAAAGAGAGTTCTTTCAACCTCGACCGAAGCATCTTTGGAGTTG 337 Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032 || ||||| | ||| || ||||||| ||| || | | || | ||| || || Sbjct 338 GAGTCATTGTATGAAGGCATTGATTTCTATAGTAAAATCACTCGCGCAAGATTCGAGGAA 397 Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092 || || |||||| | ||| | | || || || || ||| || | ||| | Sbjct 398 ATGTGCTCTGATATGTTTCGCTCTTGTTTGGATCCTGTGGAGAAAGCATTGCGGGATGCC 457 Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152 ||| |||||||| || | |||| | || | ||||| ||||| || |||||||| Sbjct 458 AAGCTTGATAAAATGAAGATTGATGATGTGGTATTGGTTGGAGGATCCACTAGAATTCCA 517 Query 552153 AAAATTCGCGAAATGTTAAGTT-CTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAA 552211 || || | || | ||||| ||| ||| ||||| || || | || || |||| Sbjct 518 AAGATACAAAAATTACTAAGTGACTTCTTT-AATGGAAAGAATCTCAACAAATCGATTAA 576 Query 552212 TCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAAC 552271 ||||| ||||| || || || || || || || || | ||| |||| | || | | Sbjct 577 CCCAGACGAGGCAGTCGCATACGGAGCTGCTATCCAGTCTGCTGTTCTCACCGGGAACTC 636 Query 552272 TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGA 552331 || | | ||| || || | || ||||||||| |||| || || | || | || Sbjct 637 TGGAG------TGCAAGATGTTCTTCTAGTAGATGTTGCTCCGCTTTCGTTGGGGATTGA 690 Query 552332 AACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAA 552391 ||| | ||| | | ||||| || || | || || || | | |||||| | | Sbjct 691 AACGGCTGGCGAAGTGATGACAAAACTGGTTGAGAGGAACGCAAGAATTCCTCACAGCAC 750 Query 552392 ATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGA 552451 ||| | || ||| | || || | || || ||| | ||||| || || ||| ||| || Sbjct 751 ATCACAAGTCTTTACCACCTACGCTGACAACCAACCAGCTGTAACTATACAAGTTTACGA 810 Query 552452 AGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTAT 552511 || |||||| | | || ||| | || || | | || || ||||| | || || Sbjct 811 GGGTGAAAGAGCACTGACGAAACACAACAACCTGTTAGGGACCTTTAACCTCTCTGGAAT 870 Query 552512 TCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGG 552571 || || || || | || || || ||||||||||||||||||| || |||||||| || Sbjct 871 ACCACCCGCACCAAGAGGTGTTCCAAAAATTGAAGTTACTTTCGACATAGATGCCAACGG 930 Query 552572 AATTTTG 552578 || ||| Sbjct 931 TATCTTG 937 >seq1782 Length=344358 Score = 111 bits (122), Expect = 1e-18 Identities = 426/667 (64%), Gaps = 8/667 (1%) Strand=Plus/Minus Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972 || ||||| || ||||| || ||| ||||||| | || || | || | || | Sbjct 44477 ACGGCTTGTGAGAGAGCAAAGAGAGTTCTTTCAACCTCGACCGAAGCATCTTTGGAGTTG 44418 Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032 || ||||| | ||| || ||||||| ||| || | | || | ||| || || Sbjct 44417 GAGTCATTGTATGAAGGCATTGATTTCTATAGTAAAATCACTCGTGCAAGATTCGAGGAA 44358 Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092 || || |||||| | ||| | | || || || || ||| || | ||| | Sbjct 44357 ATGTGCTCTGATTTGTTTCGCTCTTGTTTGGATCCTGTGGAGAAAGCATTGCGGGATGCC 44298 Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152 ||| |||||||| || | |||| | || | ||||| ||||| || |||||||| Sbjct 44297 AAGCTTGATAAAATGAAGATTGATGATGTGGTATTGGTTGGAGGATCCACTAGAATTCCA 44238 Query 552153 AAAATTCGCGAAATGTTAAGTT-CTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAA 552211 || || | || | ||||| ||| ||| ||||| || || | || || |||| Sbjct 44237 AAGATACAAAAATTACTAAGTGACTTCTTT-AATGGAAAGAATCTCAACAAATCGATTAA 44179 Query 552212 TCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAAC 552271 ||||| ||||| || || || || || || || || | ||| |||| | || | | Sbjct 44178 CCCAGACGAGGCAGTCGCATACGGAGCTGCTATCCAGTCTGCTGTTCTCACCGGTAACTC 44119 Query 552272 TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGA 552331 || | | ||| || || | || ||||||||| |||| || || | || | || Sbjct 44118 TGGAG------TGCAAGATGTTCTTCTAGTAGATGTTGCTCCGCTTTCGTTGGGGATTGA 44065 Query 552332 AACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAA 552391 ||| | ||| | | ||||| || || | || || || | | |||||| | | Sbjct 44064 AACGGCTGGCGAAGTGATGACAAAACTGGTTGAGAGGAACGCAAGAATTCCTCACAGCAC 44005 Query 552392 ATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGA 552451 ||| | || ||| | || || | || || ||| | ||||| || || ||| ||| || Sbjct 44004 ATCACAAGTCTTTACCACCTACGCTGACAACCAACCAGCTGTAACTATACAAGTTTACGA 43945 Query 552452 AGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTAT 552511 || |||||| | | || ||| | || || | | || || ||||| | || || Sbjct 43944 GGGTGAAAGAGCACTGACGAAACACAACAACCTGTTAGGGACCTTTAACCTCTCTGGAAT 43885 Query 552512 TCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGG 552571 || || || || | || || || ||||||||||||||||||| || |||||||| || Sbjct 43884 ACCACCCGCACCAAGAGGTGTTCCAAAAATTGAAGTTACTTTCGACATAGATGCCAACGG 43825 Query 552572 AATTTTG 552578 || ||| Sbjct 43824 TATCTTG 43818 >seq430 Length=1376392 Score = 111 bits (122), Expect = 1e-18 Identities = 426/667 (64%), Gaps = 8/667 (1%) Strand=Plus/Minus Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972 || ||||| || ||||| || ||| ||||||| | || || | || | || | Sbjct 44477 ACGGCTTGTGAGAGAGCAAAGAGAGTTCTTTCAACCTCGACCGAAGCATCTTTGGAGTTG 44418 Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032 || ||||| | ||| || ||||||| ||| || | | || | ||| || || Sbjct 44417 GAGTCATTGTATGAAGGCATTGATTTCTATAGTAAAATCACTCGTGCAAGATTCGAGGAA 44358 Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092 || || |||||| | ||| | | || || || || ||| || | ||| | Sbjct 44357 ATGTGCTCTGATTTGTTTCGCTCTTGTTTGGATCCTGTGGAGAAAGCATTGCGGGATGCC 44298 Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCT 552152 ||| |||||||| || | |||| | || | ||||| ||||| || |||||||| Sbjct 44297 AAGCTTGATAAAATGAAGATTGATGATGTGGTATTGGTTGGAGGATCCACTAGAATTCCA 44238 Query 552153 AAAATTCGCGAAATGTTAAGTT-CTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAA 552211 || || | || | ||||| ||| ||| ||||| || || | || || |||| Sbjct 44237 AAGATACAAAAATTACTAAGTGACTTCTTT-AATGGAAAGAATCTCAACAAATCGATTAA 44179 Query 552212 TCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAAC 552271 ||||| ||||| || || || || || || || || | ||| |||| | || | | Sbjct 44178 CCCAGACGAGGCAGTCGCATACGGAGCTGCTATCCAGTCTGCTGTTCTCACCGGTAACTC 44119 Query 552272 TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGA 552331 || | | ||| || || | || ||||||||| |||| || || | || | || Sbjct 44118 TGGAG------TGCAAGATGTTCTTCTAGTAGATGTTGCTCCGCTTTCGTTGGGGATTGA 44065 Query 552332 AACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAA 552391 ||| | ||| | | ||||| || || | || || || | | |||||| | | Sbjct 44064 AACGGCTGGCGAAGTGATGACAAAACTGGTTGAGAGGAACGCAAGAATTCCTCACAGCAC 44005 Query 552392 ATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGA 552451 ||| | || ||| | || || | || || ||| | ||||| || || ||| ||| || Sbjct 44004 ATCACAAGTCTTTACCACCTACGCTGACAACCAACCAGCTGTAACTATACAAGTTTACGA 43945 Query 552452 AGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTAT 552511 || |||||| | | || ||| | || || | | || || ||||| | || || Sbjct 43944 GGGTGAAAGAGCACTGACGAAACACAACAACCTGTTAGGGACCTTTAACCTCTCTGGAAT 43885 Query 552512 TCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGG 552571 || || || || | || || || ||||||||||||||||||| || |||||||| || Sbjct 43884 ACCACCCGCACCAAGAGGTGTTCCAAAAATTGAAGTTACTTTCGACATAGATGCCAACGG 43825 Query 552572 AATTTTG 552578 || ||| Sbjct 43824 TATCTTG 43818 >seq1148 Length=2293949 Score = 89.7 bits (98), Expect = 4e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 367543 CGTATTGGAAGATGGATTGACGTAAAAAATGAATATAAAACAATGGATACTAATTTCATG 367602 ||| ||||| | ||||||||| | ||||| || || ||||| || || || |||||| Sbjct 531208 CGTCTTGGACGTTGGATTGACTTTAAAAAAGACTACAAAACTTTGTATCCTTGGTTCATG 531149 Query 367603 GAATCTGTTATTTGGGCATTTAAACAATTATACGAACGCGGTATGATTTTTGAAGGTTAT 367662 |||||||| |||| ||||||||||||| ||| ||| | ||| | |||| Sbjct 531148 GAATCTGTCTGGTGGGTCTTTAAACAATTATTCGATAAAGGTTTCGTTTATCGTGGTTTC 531089 Query 367663 AAAGTAATGCCATATTCAACTGGTTGTAATACTGCTTTGTCACATTTTGAAGCCAAACA 367721 || || ||||||| ||| || ||||| ||||| | | || | ||||| || || || Sbjct 531088 AAGGTCATGCCATTTTCTACGGGTTGCCATACTCCCCTATCCAACTTTGAGGCAAATCA 531030 >seq765 Length=601536 Score = 89.7 bits (98), Expect = 4e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 550337 TCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACG 550396 || |||||||| | ||||||||| ||||||| |||| | || || ||||| Sbjct 40188 TCGATGGTTTTGCTTAAAATGAAAGAAACAGCTGAGGCTTACCTGGGAAAATCGGTTACT 40129 Query 550397 GATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGAT 550456 |||||||| |||| || || || | ||||| ||| | ||| | | ||||| ||||| Sbjct 40128 GATGCAGTTATAAGCGTGCCGGCTTTCTTTAACGACGCGCAAAGACGGGCTACGAAAGAG 40069 Query 550457 GCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCA 550516 || || || || || || |||||| | | || || || | ||| ||||| || || Sbjct 40068 GCGGGTAAGATGGCAGGGCTAAATGTTTTACAAATCATGAACGCACCCACTGCAGCAGCT 40009 Query 550517 CTTGCATATGGACTTGATAAACAT 550540 ||||||||||| | || ||| || Sbjct 40008 GTTGCATATGGAATCGAGAAAAAT 39985 >seq211 Length=254568 Score = 89.7 bits (98), Expect = 4e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 550337 TCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACG 550396 || |||||||| | ||||||||| ||||||| |||| | || || ||||| Sbjct 139867 TCGATGGTTTTGCTTAAAATGAAAGAAACAGCTGAGGCTTACCTGGGAAAATCGGTTACT 139926 Query 550397 GATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGAT 550456 |||||||| |||| || || || | ||||| ||| | ||| | | ||||| ||||| Sbjct 139927 GATGCAGTTATAAGCGTGCCGGCTTTCTTTAACGACGCGCAAAGACGGGCTACGAAAGAG 139986 Query 550457 GCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCA 550516 || || || || || || |||||| | | || || || | ||| ||||| || || Sbjct 139987 GCGGGTAAGATGGCAGGGCTAAATGTTTTACAAATCATGAACGCACCCACTGCAGCAGCT 140046 Query 550517 CTTGCATATGGACTTGATAAACAT 550540 ||||||||||| | || ||| || Sbjct 140047 GTTGCATATGGAATCGAGAAAAAT 140070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4027497450699410