Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciona_20savignyi_20[genbank_20GCA_5F000149265.1_202004-02-25] 34,009 sequences; 587,352,817 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq27196 82.4 2e-11 >seq27196 Length=754 Score = 82.4 bits (90), Expect = 2e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 1540 ATATTTCCGCCATTCATCATAAAGTGACTAGCGAATGTATGGCGCAATACATGCGTGCAC 1599 || || ||||| ||||||||||||||||| ||||| ||||||||||| ||||| ||| | Sbjct 499 ATGTTGCCGCCTTTCATCATAAAGTGACTGGCGAACGTATGGCGCAAGACATGACTGCTC 440 Query 1600 TGGCCCTCTGGCAAGTC 1616 ||| ||||||| |||| Sbjct 439 TGG-CCTCTGGGGAGTC 424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109008758276982