Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciona_20savignyi_20[genbank_20GCA_5F000149265.1_202004-02-25] 34,009 sequences; 587,352,817 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1013 150 3e-31 seq1592 145 1e-29 seq197 145 1e-29 seq1072 104 3e-17 seq1038 104 3e-17 seq203 104 3e-17 seq2986 87.8 3e-12 seq637 87.8 3e-12 seq368 87.8 3e-12 >seq1013 Length=546551 Score = 150 bits (166), Expect = 3e-31 Identities = 653/1003 (65%), Gaps = 36/1003 (4%) Strand=Plus/Plus Query 169535 TTATGACTCCTATCAATCCTATGTTGGCCGAATCATGCGATTCTGTTAACAAGGCATTTA 169594 |||||||||| || |||||| |||| ||| | || | || ||| | | ||| | | Sbjct 159569 TTATGACTCCAGTCTCGCCTATGCTGGCTGAAGCTTGTAAGTCAGTTGAGCAAGCAATGA 159628 Query 169595 AAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGACGGTGAACGAGTGCAAGTTC 169654 |||||| ||||| || |||| | || | || ||||| || ||| |||||||| | | Sbjct 159629 AAAAATGTCCATACGGCATGTACTCTGAGATAAAGTATGATGGAGAAAGAGTGCAATTAC 159688 Query 169655 ATAAAAATAATAACAACTTTGCCTTCTTTAGTAGAAATATGAAACCAGTTTT--ACCACA 169712 | | || || ||||| |||| || |||| | ||||||| || | | |||| Sbjct 159689 ACATGAAAGGAAAGGACTTTCATTTCTACAGCAGAAGTTTGAAACCTGTATCCAATCACA 159748 Query 169713 TAAAGTTGATTATCTCAAAGAATACCTTCCTAAAGCATTTAAAAAAGCTACGTC-TATTA 169771 || || | | | ||| ||||| | ||| | |||||| ||| || | ||| | Sbjct 159749 AAATCATGCATTT-TGAAA-AATACATCCCTGATGCATTTCCTGAAGG-ACATAGTATGA 159805 Query 169772 TCTTGGATTCTGAAATTGTTCTAGTTGACG--AACACAATATACCA-CTTCCGTTTGGAA 169828 | ||||| || || | |||| |||| || ||| | ||| ||||| ||||| | Sbjct 159806 TACTGGATAGCGAGGTTTTGTTAGTAGACGTTAAAACAGGAAACCCTCTTCCATTTGGTA 159865 Query 169829 GTTTAGGAATACACAAAAAGAAAGAATATAAAAACTCTAATATGTGTTTGTTCGTCTTTG 169888 | ||||| || ||||||| ||| | | | | ||| | |||||||| | |||| Sbjct 159866 CGCTGGGAATCCATAAAAAGACCAAATTCACAGATGCAAATGTATGTTTGTTTATATTTG 159925 Query 169889 ATTGTCTATACTTTGATGGATTTGATATGACTGATATCCCATTGGTTGATAGAAGATCTT 169948 || |||| | || ||||| || ||| | | | || || |||||| | Sbjct 159926 ATATTCTACATTTCAATGGAGAAAATCTGATGGGAAAGTCGATGAAAGAAAGAAGAACGA 159985 Query 169949 TTCTCAAAGAT--GTAATGACAGAAATACCTAATAGAATAGTATTTTCGGAATTGACAAA 170006 || | | ||| ||| | ||||| || ||| | || | || || || || | || Sbjct 159986 TTTT-AGAGACCAGTATCCAT-GAAATTCCAAATCGTGTAATGTTGTCAGAGTTAA--AA 160041 Query 170007 TATTACTAACGAATCACAACTGACAG-ATGTATTAGATGATGCAC--TAACAAGAAAA-- 170061 | | | ||| || || | |||| | | || ||| ||| || |||| || Sbjct 160042 TTTGTC-AAC-AAGCAGGA-TGACCTTAAGCATATGATCGTGCGGGTTATCAAGGAAGGG 160098 Query 170062 CTAGAAGGTTTGGTTTTAAAAGATATTAATGGTATATATGAGCCAGGAAAACGTAGATGG 170121 ||||| ||| |||||||||||||| | || ||||| ||||| || |||||| | ||| Sbjct 160099 CTAGAGGGTCTGGTTTTAAAAGATGTCAAAGGTATCTATGAACCGGGAAAAAGGCATTGG 160158 Query 170122 CTTAAAATAAAGAGAGACTACTTGAATG-AGGGTTCGATGGCGGATTCTGCAGATTTAGT 170180 || ||| | || | |||||||| |||| | ||| ||||| ||| |||| |||||||| Sbjct 160159 CTCAAAGTTAAAAAGGACTACTT-AATGCAAGGTCAAATGGCTGATACTGCTGATTTAGT 160217 Query 170181 AGTATTGGGGGCATATTATGGAAAAGGAACAAAGGGTGGAATGATGGCAGTATTTTTGAT 170240 ||| | ||||| |||||||| | || | || ||||| |||||| | || || | || Sbjct 160218 GGTACTTGGGGCTTATTATGGTACCGGTAGCAAAGGTGGCATGATGTCTGTGTTCCTAAT 160277 Query 170241 GGGTTGCTACGATGACGACTCTGGTAAATGGAAGACTGTAACTAAATGTT----CTGGAC 170296 |||| || ||||| | | || ||| ||||| ||| || ||| ||||| Sbjct 160278 GGGTGTGTATGATGATAAAGCATCCAAGTGGTGCACTGTTACT-AAGGTTGGAAATGGAC 160336 Query 170297 ATGATGATAACACTTT--AAGGGTTTTGCAAGACCAATTAAAGATGATTAAAATAAGTAA 170354 |||||||| | ||||| || || || | ||| | || ||| | ||||| || || Sbjct 160337 ATGATGATGAAACTTTAGAAAAAATTAACA--AACAACTGAAAATGGTGAAAATCAGCAA 160394 Query 170355 GGATCCCaaaaaaaTTCCAGAGTGG-TTAGTAGTTAATAAAATATATATTCCCGATTTTG 170413 |||| || ||| | ||| ||| ||| | | |||| || || | || ||||| | Sbjct 160395 GGATGTAAATAAAGTCCCAACATGGCTTAAT-TTAAATAGAAACCATGTCCCAGATTTAG 160453 Query 170414 TAGTAGAGGATCCTACACAATCTCCAATCTGGGAGATTTCAGGAGCTGAGTTCACATCAT 170473 | || | ||||| | || || | ||||||||| | ||| | ||||||||| | Sbjct 160454 TGGTTGCTGATCCGAAGTCCTCGCCTGTTTGGGAGATTACTGGAACCGAGTTCACAAAGT 160513 Query 170474 CGAAGTCTCATACGGCAAATGGAATATCTATTAGATTTCCTAG 170516 | | ||||| || || ||| || || || || ||||| || Sbjct 160514 CAGACTCTCACACTGCGGGTGGGATTTCAATCAGGTTTCCAAG 160556 >seq1592 Length=1045015 Score = 145 bits (160), Expect = 1e-29 Identities = 651/1004 (65%), Gaps = 38/1004 (4%) Strand=Plus/Plus Query 169535 TTATGACTCCTATCAATCCTATGTTGGCCGAATCATGCGATTCTGTTAACAAGGCATTTA 169594 |||||||||| || |||||| |||| ||| | || | || ||| | ||||| | | Sbjct 681429 TTATGACTCCAGTCTCGCCTATGCTGGCTGAAGCTTGTAAGTCAGTTGAGCAGGCAATGA 681488 Query 169595 AAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGACGGTGAACGAGTGCAAGTTC 169654 |||||| ||||| || |||| | | || | || ||||| || ||| |||||||| | | Sbjct 681489 AAAAATGTCCATACGGCATGTATTCTGAGATAAAGTATGATGGAGAAAGAGTGCAATTAC 681548 Query 169655 ATAAAAATAATAACAACTTTGCCTTCTTTAGTAGAAATATGAAACCAGTTTT--ACCACA 169712 ||| || || ||||| |||| || |||| | | ||||| || | | |||| Sbjct 681549 ATATGAAAGGAAAGGACTTTCATTTCTACAGCAGAAGTTTAAAACCCGTATCCAATCACA 681608 Query 169713 TAAAGTTGATTATCTCAAAGAATACCTTCCTAAAGCATTTAAAAAAGCTACGTC-TATTA 169771 || || | | | ||| ||||| ||||| | |||||| ||| || | ||| | Sbjct 681609 AAATCATGCATTT-TGAAA-AATACATTCCTGATGCATTTCCTGAAGG-ACATAGTATGA 681665 Query 169772 TCTTGGATTCTGAAATTGTTCTAGTTGACG--AACACAATATACCA-CTTCCGTTTGGAA 169828 | ||||| || || | |||| || | || ||| | ||| ||||| ||||| | Sbjct 681666 TACTGGATAGCGAGGTTTTGTTAGTAGATGTTAAAACAGGAAACCCTCTTCCATTTGGTA 681725 Query 169829 GTTTAGGAATACACAAAAAGAAAGAATATAAAAACTCTAATATGTGTTTGTTCGTCTTTG 169888 | ||||| || ||||||| ||| | | | | ||| | |||||||| |||||| Sbjct 681726 CGCTGGGAATTCATAAAAAGACCAAATTCACAGATGCAAATGTATGTTTGTTTATCTTTG 681785 Query 169889 ATTGTCTATACTTTGATGGATTTGATATGACTGATATCCCATTGGTTGATAGAAGATCTT 169948 || |||| | ||| ||||| || ||| | | | || || |||||| | Sbjct 681786 ATATTCTACATTTTAATGGAGAAAATCTGATGGGAAAGTCGATGAAGGAAAGAAGAACCA 681845 Query 169949 TTCTCAAAGAT--GTAATGACAGAAATACCTAATAGAATAGTATTTTCGGAATTGACAAA 170006 || | | ||| ||| | ||||| || ||| | | | || || || || | || Sbjct 681846 TTTT-AGAGACCAGTATCCAT-GAAATTCCAAATCGTGTGATGTTGTCAGAGTTAA--AA 681901 Query 170007 TATTACTAACGAATCACAACTGACAG-ATGTATTAGATGATGC-----ACTAACAAGAAA 170060 | | | ||| || || | |||| | | || ||| ||| | ||| |||| Sbjct 681902 TTTGTC-AAC-AAGCAAGA-TGACCTTAAGCATATGATTGTGCGGGTTATTAA--AGAAG 681956 Query 170061 -ACTAGAAGGTTTGGTTTTAAAAGATATTAATGGTATATATGAGCCAGGAAAACGTAGAT 170119 ||| ||||| |||||||||||||| | || ||||| ||||| || |||||| | | Sbjct 681957 GACTTGAAGGGCTGGTTTTAAAAGATGTCAAAGGTATCTATGAACCGGGAAAAAGGCACT 682016 Query 170120 GGCTTAAAATAAAGAGAGACTACTTGAATG-AGGGTTCGATGGCGGATTCTGCAGATTTA 170178 |||| ||| | || | |||||||| |||| | || ||||| ||| |||| |||||| Sbjct 682017 GGCTCAAAGTTAAAAAGGACTACTT-AATGCAAGGCCAAATGGCTGATACTGCTGATTTA 682075 Query 170179 GTAGTATTGGGGGCATATTATGGAAAAGGAACAAAGGGTGGAATGATGGCAGTATTTTTG 170238 || ||| | ||||| |||||||| | || | || ||||| |||||| | || || | Sbjct 682076 GTGGTACTTGGGGCTTATTATGGTACCGGTAGCAAAGGTGGCATGATGTCTGTGTTCCTA 682135 Query 170239 ATGGGTTGCTACGATGACGACTCTGGTAAATGGAAGACTGTAACTAAATGTT----CTGG 170294 |||||| || ||||| | | | | ||| ||||| ||| || ||| ||| Sbjct 682136 ATGGGTGTGTATGATGATAAGGCATCTCAGTGGTGCACTGTTACT-AAGGTTGGAAATGG 682194 Query 170295 ACATGATGATAACACTTT--AAGGGTTTTGCAAGACCAATTAAAGATGATTAAAATAAGT 170352 |||||||||| | ||||| || || || | ||| | || ||| | ||||| || Sbjct 682195 ACATGATGATGAAACTTTAGAAAAAATTAACA--AACAACTGAAAATGGTGAAAATCAGC 682252 Query 170353 AAGGATCCCaaaaaaaTTCCAGAGTGGTTAGTAGTTAATAAAATATATATTCCCGATTTT 170412 |||||| || ||| | ||| ||| || | |||| || || | || ||||| Sbjct 682253 AAGGATGTAAATAAAGTCCCAACATGGCTAAATTTAAATAGAAACCATGTCCCAGATTTA 682312 Query 170413 GTAGTAGAGGATCCTACACAATCTCCAATCTGGGAGATTTCAGGAGCTGAGTTCACATCA 170472 || || | ||||| | || || | |||||||| | ||| | ||||||||| Sbjct 682313 GTGGTGGCTGATCCGAAGTCCTCGCCTGTTTGGGAGATCACTGGAACCGAGTTCACAAAG 682372 Query 170473 TCGAAGTCTCATACGGCAAATGGAATATCTATTAGATTTCCTAG 170516 || | ||||| || || ||| || || || | ||||| || Sbjct 682373 TCAGACTCTCACACTGCGGGTGGGATTTCAATCCGGTTTCCAAG 682416 >seq197 Length=433710 Score = 145 bits (160), Expect = 1e-29 Identities = 651/1004 (65%), Gaps = 38/1004 (4%) Strand=Plus/Plus Query 169535 TTATGACTCCTATCAATCCTATGTTGGCCGAATCATGCGATTCTGTTAACAAGGCATTTA 169594 |||||||||| || |||||| |||| ||| | || | || ||| | ||||| | | Sbjct 59546 TTATGACTCCAGTCTCGCCTATGCTGGCTGAAGCTTGTAAGTCAGTTGAGCAGGCAATGA 59605 Query 169595 AAAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGACGGTGAACGAGTGCAAGTTC 169654 |||||| ||||| || |||| | | || | || ||||| || ||| |||||||| | | Sbjct 59606 AAAAATGTCCATACGGCATGTATTCTGAGATAAAGTATGATGGAGAAAGAGTGCAATTAC 59665 Query 169655 ATAAAAATAATAACAACTTTGCCTTCTTTAGTAGAAATATGAAACCAGTTTT--ACCACA 169712 ||| || || ||||| |||| || |||| | | ||||| || | | |||| Sbjct 59666 ATATGAAAGGAAAGGACTTTCATTTCTACAGCAGAAGTTTAAAACCCGTATCCAATCACA 59725 Query 169713 TAAAGTTGATTATCTCAAAGAATACCTTCCTAAAGCATTTAAAAAAGCTACGTC-TATTA 169771 || || | | | ||| ||||| ||||| | |||||| ||| || | ||| | Sbjct 59726 AAATCATGCATTT-TGAAA-AATACATTCCTGATGCATTTCCTGAAGG-ACATAGTATGA 59782 Query 169772 TCTTGGATTCTGAAATTGTTCTAGTTGACG--AACACAATATACCA-CTTCCGTTTGGAA 169828 | ||||| || || | |||| || | || ||| | ||| ||||| ||||| | Sbjct 59783 TACTGGATAGCGAGGTTTTGTTAGTAGATGTTAAAACAGGAAACCCTCTTCCATTTGGTA 59842 Query 169829 GTTTAGGAATACACAAAAAGAAAGAATATAAAAACTCTAATATGTGTTTGTTCGTCTTTG 169888 | ||||| || ||||||| ||| | | | | ||| | |||||||| |||||| Sbjct 59843 CGCTGGGAATTCATAAAAAGACCAAATTCACAGATGCAAATGTATGTTTGTTTATCTTTG 59902 Query 169889 ATTGTCTATACTTTGATGGATTTGATATGACTGATATCCCATTGGTTGATAGAAGATCTT 169948 || |||| | ||| ||||| || ||| | | | || || |||||| | Sbjct 59903 ATATTCTACATTTTAATGGAGAAAATCTGATGGGAAAGTCGATGAAGGAAAGAAGAACCA 59962 Query 169949 TTCTCAAAGAT--GTAATGACAGAAATACCTAATAGAATAGTATTTTCGGAATTGACAAA 170006 || | | ||| ||| | ||||| || ||| | | | || || || || | || Sbjct 59963 TTTT-AGAGACCAGTATCCAT-GAAATTCCAAATCGTGTGATGTTGTCAGAGTTAA--AA 60018 Query 170007 TATTACTAACGAATCACAACTGACAG-ATGTATTAGATGATGC-----ACTAACAAGAAA 170060 | | | ||| || || | |||| | | || ||| ||| | ||| |||| Sbjct 60019 TTTGTC-AAC-AAGCAAGA-TGACCTTAAGCATATGATTGTGCGGGTTATTAA--AGAAG 60073 Query 170061 -ACTAGAAGGTTTGGTTTTAAAAGATATTAATGGTATATATGAGCCAGGAAAACGTAGAT 170119 ||| ||||| |||||||||||||| | || ||||| ||||| || |||||| | | Sbjct 60074 GACTTGAAGGGCTGGTTTTAAAAGATGTCAAAGGTATCTATGAACCGGGAAAAAGGCACT 60133 Query 170120 GGCTTAAAATAAAGAGAGACTACTTGAATG-AGGGTTCGATGGCGGATTCTGCAGATTTA 170178 |||| ||| | || | |||||||| |||| | || ||||| ||| |||| |||||| Sbjct 60134 GGCTCAAAGTTAAAAAGGACTACTT-AATGCAAGGCCAAATGGCTGATACTGCTGATTTA 60192 Query 170179 GTAGTATTGGGGGCATATTATGGAAAAGGAACAAAGGGTGGAATGATGGCAGTATTTTTG 170238 || ||| | ||||| |||||||| | || | || ||||| |||||| | || || | Sbjct 60193 GTGGTACTTGGGGCTTATTATGGTACCGGTAGCAAAGGTGGCATGATGTCTGTGTTCCTA 60252 Query 170239 ATGGGTTGCTACGATGACGACTCTGGTAAATGGAAGACTGTAACTAAATGTT----CTGG 170294 |||||| || ||||| | | | | ||| ||||| ||| || ||| ||| Sbjct 60253 ATGGGTGTGTATGATGATAAGGCATCTCAGTGGTGCACTGTTACT-AAGGTTGGAAATGG 60311 Query 170295 ACATGATGATAACACTTT--AAGGGTTTTGCAAGACCAATTAAAGATGATTAAAATAAGT 170352 |||||||||| | ||||| || || || | ||| | || ||| | ||||| || Sbjct 60312 ACATGATGATGAAACTTTAGAAAAAATTAACA--AACAACTGAAAATGGTGAAAATCAGC 60369 Query 170353 AAGGATCCCaaaaaaaTTCCAGAGTGGTTAGTAGTTAATAAAATATATATTCCCGATTTT 170412 |||||| || ||| | ||| ||| || | |||| || || | || ||||| Sbjct 60370 AAGGATGTAAATAAAGTCCCAACATGGCTAAATTTAAATAGAAACCATGTCCCAGATTTA 60429 Query 170413 GTAGTAGAGGATCCTACACAATCTCCAATCTGGGAGATTTCAGGAGCTGAGTTCACATCA 170472 || || | ||||| | || || | |||||||| | ||| | ||||||||| Sbjct 60430 GTGGTGGCTGATCCGAAGTCCTCGCCTGTTTGGGAGATCACTGGAACCGAGTTCACAAAG 60489 Query 170473 TCGAAGTCTCATACGGCAAATGGAATATCTATTAGATTTCCTAG 170516 || | ||||| || || ||| || || || | ||||| || Sbjct 60490 TCAGACTCTCACACTGCGGGTGGGATTTCAATCCGGTTTCCAAG 60533 >seq1072 Length=3228912 Score = 104 bits (114), Expect = 3e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 || ||||| ||||| | ||||||| ||||| |||||||| || |||||||| | ||| Sbjct 2898256 TGGAATTCCCCAGATAGAACTCTTCTGGTGTATATATTACTTGTGTATGGTTCAATTGAT 2898315 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 || || ||||||| ||||||||||| || ||||| ||||| || || | | | ||| Sbjct 2898316 TCGTTATTTCCCAGGATTTGAGCAGTGGATGCAGTTGGCATTGGAGCTATGAGAAGACTG 2898375 Query 75842 TTTCTGAGACCATGT 75856 || |||| ||||||| Sbjct 2898376 TTCCTGATACCATGT 2898390 Score = 86.0 bits (94), Expect = 9e-12 Identities = 105/142 (74%), Gaps = 1/142 (1%) Strand=Plus/Plus Query 75439 CAGACT-CCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATAT 75497 |||||| ||| || |||||||||||||| || ||||||| || | || || ||||| | Sbjct 2897206 CAGACTTCCAGCCATAGAAATGCATGCTGGTCAGTTTGGCGTAGTTAGGCTCAGCTATGT 2897265 Query 75498 GAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAA 75557 | || || | ||| || || ||||||||||| |||| || || ||||| || | | Sbjct 2897266 GGATGTTGAGACTCTGGCTCTGGTCGATGAAAGCAGCTCTGTCGGCGGCCATCTTGACGA 2897325 Query 75558 TGGTCTTTTGAGGAATTTCCCA 75579 || ||||||| | || ||||| Sbjct 2897326 TGTTCTTTTGCGATATCTCCCA 2897347 >seq1038 Length=472731 Score = 104 bits (114), Expect = 3e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 || ||||| ||||| | ||||||| ||||| |||||||| || |||||||| | ||| Sbjct 78628 TGGAATTCCCCAGATAGAACTCTTCTGGTGTATATATTACTTGTGTATGGTTCAATTGAT 78687 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 || || ||||||| ||||||||||| || ||||| ||||| || || | | | ||| Sbjct 78688 TCGTTATTTCCCAGGATTTGAGCAGTGGATGCAGTTGGCATTGGAGCTATGAGAAGACTG 78747 Query 75842 TTTCTGAGACCATGT 75856 || |||| ||||||| Sbjct 78748 TTCCTGATACCATGT 78762 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/148 (73%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 75439 CAGACT-CCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATAT 75497 |||||| ||| || |||||||||||||| || ||||||| ||| | || || ||||| | Sbjct 77592 CAGACTTCCAGCCATAGAAATGCATGCTAGTCAGTTTGGCATAGTTAGGCTCAGCTATGT 77651 Query 75498 GAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAA 75557 | || || | ||| || || ||||| ||||| ||| || || ||||| || | | Sbjct 77652 GGATGTTGAGGCTCTGGCTCTGGTCGATAAAAGCAGCTCGGTCGGCGGCCATCTTGACGA 77711 Query 75558 TGGTCTTTTGAGGAATTTCCCAAATAGT 75585 || ||||||| | || ||||| | ||| Sbjct 77712 TGTTCTTTTGCGATATCTCCCACACAGT 77739 >seq203 Length=1902415 Score = 104 bits (114), Expect = 3e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 || ||||| ||||| | ||||||| ||||| |||||||| || |||||||| | ||| Sbjct 1535334 TGGAATTCCCCAGATAGAACTCTTCTGGTGTATATATTACTTGTGTATGGTTCAATTGAT 1535393 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 || || ||||||| ||||||||||| || ||||| ||||| || || | | | ||| Sbjct 1535394 TCGTTATTTCCCAGGATTTGAGCAGTGGATGCAGTTGGCATTGGAGCTATGAGAAGACTG 1535453 Query 75842 TTTCTGAGACCATGT 75856 || |||| ||||||| Sbjct 1535454 TTCCTGATACCATGT 1535468 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/148 (73%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 75439 CAGACT-CCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATAT 75497 |||||| ||| || |||||||||||||| || ||||||| ||| | || || ||||| | Sbjct 1534298 CAGACTTCCAGCCATAGAAATGCATGCTAGTCAGTTTGGCATAGTTAGGCTCAGCTATGT 1534357 Query 75498 GAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAA 75557 | || || | ||| || || ||||| ||||| ||| || || ||||| || | | Sbjct 1534358 GGATGTTGAGGCTCTGGCTCTGGTCGATAAAAGCAGCTCGGTCGGCGGCCATCTTGACGA 1534417 Query 75558 TGGTCTTTTGAGGAATTTCCCAAATAGT 75585 || ||||||| | || ||||| | ||| Sbjct 1534418 TGTTCTTTTGCGATATCTCCCACACAGT 1534445 >seq2986 Length=361983 Score = 87.8 bits (96), Expect = 3e-12 Identities = 103/139 (74%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCT---TGTGACATAACTCCCATTT 46339 |||||||||| |||||| | || | |||||||| | || |||||| || || Sbjct 208073 TTTAAAAGTCTGCATCTAGTGTGAATTTCATATCTTCTGCTTTTGCCATAACACCGGCTT 208132 Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399 |||||||||| || ||||| || || || || || || |||||||||| ||| || | Sbjct 208133 TTTGGTATTCGCCCACACGCTTTTCAAAGAAGTTGGTCTTGCCTTCCAGTGAGATGAGCT 208192 Query 46400 CCATAAAATCAAACGGATT 46418 |||| || ||||||||||| Sbjct 208193 CCATGAAGTCAAACGGATT 208211 >seq637 Length=333953 Score = 87.8 bits (96), Expect = 3e-12 Identities = 155/224 (69%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 ||||||||||| || | ||| || || || || | |||||||| || || || || || Sbjct 27918 TCATCTCTACTGATGAGTTCATTGGAGAAAGTTAAGCCAGGCATCAGCCCTCGTTTCTTT 27977 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 | ||| || || || || || || ||| || || || || || |||| || |||||| Sbjct 27978 AACCAGAAAATGGCAGCAAATGACCCACTGAAAAAGATCCCCTCCACAGAGGCAAATGCG 28037 Query 46774 ACAAGTCTCTCTCCGTAACTGGCATCAT--TATGA-ATCCACCTTTGAGCCCAATCAGCC 46830 | | || || | || || || | | ||| |||||| | ||||||| || ||| Sbjct 28038 ATTATTCGTTCAGCATACAGTGCGTCCTTGTCTGATATCCACTTGAGAGCCCACTCTGCC 28097 Query 46831 TTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 || ||| ||||| |||| ||||| || ||||| || ||||| Sbjct 28098 TTCTTCCGCACACATGGCAAGGTTTCGATGGCATTGAAAAGAAA 28141 >seq368 Length=471785 Score = 87.8 bits (96), Expect = 3e-12 Identities = 103/139 (74%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 46283 TTTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCT---TGTGACATAACTCCCATTT 46339 |||||||||| |||||| | || | |||||||| | || |||||| || || Sbjct 207880 TTTAAAAGTCTGCATCTAGTGTGAATTTCATATCTTCTGCTTTTGCCATAACACCGGCTT 207939 Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399 |||||||||| || ||||| || || || || || || |||||||||| ||| || | Sbjct 207940 TTTGGTATTCGCCCACACGCTTTTCAAAGAAGTTGGTCTTGCCTTCCAGTGAGATGAGCT 207999 Query 46400 CCATAAAATCAAACGGATT 46418 |||| || ||||||||||| Sbjct 208000 CCATGAAGTCAAACGGATT 208018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712631322674880