Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1109944 95.1 1e-14 seq528558 87.8 2e-12 >seq1109944 Length=1004 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCA--ATATGTGCTTAATGAAAT 16649 || ||||| || || || ||||| |||||||| || |||| | ||| | | ||||||| Sbjct 489 TTTTCATTGACTATGCCATCACTGGCAGCAAAGAATGCCAGCACATGAGAT--ATGAAAT 432 Query 16650 ATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTT 16709 || || |||||| | || | ||| | | | || || ||||| | |||||| || | Sbjct 431 GCTTCTCCTCAGATTTCAGTGCCTCCCAGTGTATCAAGTCCTTGGAAAGATCCACCTCCT 372 Query 16710 CTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTA 16769 | | ||||| || ||| | || || || |||||||||||||| |||| ||||| | Sbjct 371 CCGCTGTCCAGAATGATGCCTCCGCTTTCTTGTACATTTTCCAAATGTCATGGTATTCAA 312 Query 16770 TGGGAAATACGAC 16782 | |||||||| || Sbjct 311 TAGGAAATACCAC 299 >seq528558 Length=3392 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || ||||||||||| || || ||| ||||| | |||||||| ||||||| ||||| Sbjct 1177 TCATCTCTGCTGATGAGCTCATTGCTGAAAGTGAGGCCTGGCATGATTCCTCGCTTCTTC 1236 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCG 16345 | |||||| || || || || ||||| || ||||| || ||||| |||| || || || Sbjct 1237 AGCCAGAAGATGGCTGCGAAGGACCCAGAGAAGAAGATCCCCTCCACAGCAGCGAAGGCC 1296 Query 16346 ATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCT 16405 | | |||||| | || | |||| | | | ||||| |||| || || Sbjct 1297 ACCACGCGTTCCCCATAGGACGCATTCTGGTCATTGATCCAGCGGATGGCCCAGTCCGCC 1356 Query 16406 TTTTGTTTTATACAATCCATCGTTTCTATGGCCTT--AAACAATTTCTCT 16453 |||| ||| | ||| |||||| || ||||| || ||| || ||||| Sbjct 1357 TTTTCTTTCACACATGGCATCGTCTCAATGGCGTTGAAAAGAAAATCTCT 1406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504215245061920