Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq688428 98.7 8e-16 seq100890 95.1 1e-14 >seq688428 Length=1164 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| || | ||||| || || |||||||| || || | | Sbjct 820 CCACCACGCAGACGAAGAACCAGGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCTGAC 761 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || || |||| ||||| || ||||| ||| |||| | | |||||||| || Sbjct 760 AAAGTGCGGCCGTCTTCCAGTTGCTTGCCAGCAAAAATCAAACGTTGCTGGTCTGGTGGA 701 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||| || ||| || | | | ||| || ||||| Sbjct 700 ATGCCTTCCTTGTCCTGGATTTTAGCTTTTACATTTTCAATAGTGTCTGAAGGCTCTACC 641 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||||||||| | ||||||||||| |||||||| Sbjct 640 TCAAGAGTAATGGTCTTGCCGGTAAGAGTTTTGACAAAGATTTGCAT 594 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| || || || | || |||| ||| | || ||||| || |||||||| ||||| | Sbjct 1049 TCCACCACGGAGACGAAGAACCAGATGAAGTGTAGACTCTTTCTGAATGTTGTAGTCAGA 990 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 || || | | || |||||||||||||| ||| | || || | |||||| || ||| Sbjct 989 AAGAGTGCGTCCATCTTCCAGCTGTTTGCCAGCAAAGATCAGACGCTGCTGATCTGGGGG 930 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | |||||| ||||| |||||| |||||| | | | || || |||||| Sbjct 929 AATGCCTTCTTTGTCCTGGATCTTGGCTTTCACATTCTCTATGGTGTCCGAAGGCTCCAC 870 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | || || ||||| || ||||| Sbjct 869 CTCAAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCAT 822 >seq100890 Length=8634 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 29028 CCTCAGTCATCACCCGCTGCACAAAGTCGCGGCCCTTGACGAGCAGCACGTACTCGCAGC 29087 ||||||| | |||| ||| |||||| | | |||||||| || |||| |||| ||||| Sbjct 2188 CCTCAGTTAGCACCTGCTCCACAAACTGGTCTCCCTTGACTTGCCGCACATACTTGCAGC 2247 Query 29088 GGTCGTACCAGCGGGCGTGTTGCTGCCACGGCGCGTCGTCGGGTTCCCAATCCTTCAGAC 29147 | | ||||||||||||| | |||||||| |||| ||| | ||||| | | |||| | Sbjct 2248 GAGGGAACCAGCGGGCGTGCTCGTGCCACGGGTCGTCCTCGCGCTCCCAGTTCCTCAGCC 2307 Query 29148 CGCCGTCGCAGCAAAAGCAC 29167 | || |||||| | || ||| Sbjct 2308 CTCCATCGCAGAAGAAACAC 2327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416463681395696