Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq688428 122 7e-23 >seq688428 Length=1164 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| || | |||||||||||| ||||||||||| || | |||||| ||| || Sbjct 1030 ACCAGATGAAGTGTAGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTGCGTCCATCTTCC 971 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| ||||| |||| |||||||||||||| || || ||||| || ||||| Sbjct 970 AGCTGTTTGCCAGCAAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTCTTTGTCCTGG 911 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||| || | || | |||||||| ||| ||||| | || | || ||| Sbjct 910 ATCTTGGCTTTCACATTCTCTATGGTGTCCGAAGGCTCCACCTCAAGAGTGATGGTCTTG 851 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || || || ||||| ||||||||| Sbjct 850 CCAGTGAGGGTCTTCACAAAGATCTGCATG 821 Score = 113 bits (124), Expect = 4e-20 Identities = 154/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCC 118586 ||||||||| | || || ||||| || |||||||| || | | |||| ||| ||| Sbjct 575 CACCAAGTGAAGGGTGGATTCTTTCTGGATGTTGTAGTC--TGAAAGTGTGCGGCCATCT 518 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || || || || |||||| |||| ||||| ||||| || ||||| ||||| || |||||| Sbjct 517 TCAAGTTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATGCCTTCTTTGTCT 458 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 || || |||||| | ||| | |||||| | | || || || | ||| | ||| Sbjct 457 TGGATCTTGGCTTTAACATTTTCAATGGTGTCTGAGGGTTCAACTTCTAGGGTTATTGTT 398 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || || || || || |||||||||||| Sbjct 397 TTTCCCGTGAGGGTCTTCACGAAAATCTGCATG 365 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | || || ||||| |||||||||||||| || |||||| || || Sbjct 802 ACCAGGTGAAGGGTGGATTCTTTCTGAATGTTGTAATCTGACAAAGTGCGGCCGTCTTCC 743 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || ||||| | || | ||| ||||| || || || ||||| |||||||| Sbjct 742 AGTTGCTTGCCAGCAAAAATCAAACGTTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGG 683 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| ||| || | ||| | ||||| | ||| ||||| | || | || ||| Sbjct 682 ATTTTAGCTTTTACATTTTCAATAGTGTCTGAAGGCTCTACCTCAAGAGTAATGGTCTTG 623 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| |||||||| ||||| || ||||| Sbjct 622 CCGGTAAGAGTTTTGACAAAGATTTGCAT 594 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||||||||| || |||||||| ||| | |||||| ||| || |||||||| ||| Sbjct 108 GTAGACTCTTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCTTCAAGCTGTTTCCCA 49 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || |||| || |||||||| || || || ||||| || ||||| Sbjct 48 GCAAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427876066371952