Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_002796.1 Length=40003 Score E Sequences producing significant alignments: (Bits) Value seq582607 96.9 9e-16 seq572645 96.9 9e-16 >seq582607 Length=568 Score = 96.9 bits (106), Expect = 9e-16 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 4356 TTGCAGTTGATGTCTAACGAAACATGGATGACAGCTCAAGATGCAGTTGATAAAGGATTT 4415 ||||| || ||| |||| || || |||||||| || |||||||||||||||||||| ||| Sbjct 453 TTGCAATTAATGGCTAATGAGACTTGGATGACGGCACAAGATGCAGTTGATAAAGGCTTT 512 Query 4416 GCAGATAATATTATGTTTGTAGATGCTAATAAACCAGTATTTTCTAACTCA 4466 || || | ||||||||||| |||| || |||| |||| | |||||| Sbjct 513 GCTGACGAGATTATGTTTGTCGATGACAAGCAACCTCAATTTACCAACTCA 563 >seq572645 Length=2957 Score = 96.9 bits (106), Expect = 9e-16 Identities = 80/95 (84%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 831 CTAAAAGTTGCTTCAGT-TGTCCCGAATGTTGATACAGGCGAACCAACTGAGCTAATGCC 889 || ||| ||||||| | ||||| ||| ||||||||||||||||||||| |||||||||| Sbjct 1168 CTTAAATTTGCTTCTATCTGTCC-GAACGTTGATACAGGCGAACCAACTAAGCTAATGCC 1226 Query 890 TTGGCAAAAATTCATTATGTGTATGCTGATAGGCT 924 ||||| ||||||||||| |||||| || |||| Sbjct 1227 GTGGCAGGAATTCATTATGGCTATGCTAATTGGCT 1261 Score = 82.4 bits (90), Expect = 2e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 2258 TGAAGATTCAATAGGAATACAGGTAGATAAACGAAAAGCAACTTTAAAAATTGACGTTGT 2317 ||||||| || || || ||||| ||||| || || || | |||||||| || || Sbjct 2763 TGAAGATAAGATTGGCATTCAGGTTGATAAGGCTAAGGCCACACTGAAAATTGATGTGGT 2822 Query 2318 TGATGCGATTATTGATGCTTTATTTCAAGGGATGTATCACTTTGAGGA 2365 ||||||| | |||||||| ||||| |||| |||||||||||||| || Sbjct 2823 TGATGCGCTGATTGATGCCTTATTCCAAGCCATGTATCACTTTGAAGA 2870 Score = 80.6 bits (88), Expect = 7e-11 Identities = 89/119 (75%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 1897 CAATTGATGCTAAAGAAAAACAAGATGGTATTAATTATAGAGAACTAGAAAAATATGGTT 1956 ||||||| || ||||||||||||||||| || || ||| | | ||| || | || | Sbjct 2354 CAATTGAAGCCAAAGAAAAACAAGATGGCATCAACTATCGTAATTTAGCTCAAAAGGGAT 2413 Query 1957 TTTGTACAGTCACAAGCCACCAACAAGGGCTAATCAATGATGATGAGGTCTATGAATGG 2015 |||| || | | || |||| |||||||||||| |||||||| | |||||| | ||| Sbjct 2414 TTTGCACGATTAGCAGTCACCCACAAGGGCTAATTAATGATGAACAAGTCTATCAGTGG 2472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126177740667480