Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1109944 122 1e-22 seq31215 87.8 2e-12 >seq1109944 Length=1004 Score = 122 bits (134), Expect = 1e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 ||||||||||| ||||| ||||||||||| ||||| || |||| ||||| ||| ||| Sbjct 492 AAATTTTCATTGACTATGCCATCACTGGCAGCAAAGAATGCCAGCACATGAGATATGAAA 433 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 34085 | || || || | | | ||| | ||| | | | || || || | |||||| || Sbjct 432 TGCTTCTCCTCAGATTTCAGTGCCTCCCAGTGTATCAAGTCCTTGGAAAGATCCACCTCC 373 Query 34086 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGG 34145 ||| ||||||| ||||||||||| || || || ||||| ||||| |||||||| |||| Sbjct 372 TCCGCTGTCCAGAATGATGCCTCCGCTTTCTTGTACATTTTCCAAATGTCATGGTATTCA 313 Query 34146 ATTGGGAAAATAACAAATCTATTTGGATTT 34175 || || || | ||||| | | ||| ||| Sbjct 312 ATAGGAAATACCACAAAACGACGTGGGTTT 283 >seq31215 Length=2442 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 63188 TTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGA 63247 ||| ||||| || ||||| || | || || || ||||||||||| || |||||||| | Sbjct 1679 TTCAAACTCCTCGCCCCACACTTCGTGCAGTCCAGGACATTCATTGGGGCACATCAAGGT 1738 Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 63307 ||| ||||||| |||| ||| | ||||| || || || || ||||| | || || Sbjct 1739 CCAGTCTCCGTTCTCCTCCACCCTCTTCATGAACAGGTCTGGGATCCACATGGCGTAGAA 1798 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 || || | | | ||||| || || || ||||| || || || ||||| | | Sbjct 1799 CAGGTCCCGAGCCCGCGTCTCCTCCTTCCCAGTGTTCTTCTTCAGGTCCAGGAAGTCAAA 1858 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGC 63400 || || | ||||| || |||| ||| ||||| Sbjct 1859 GATGTCCGCGTGCCAGGGCTCCAGGTAGATGGC 1891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620951689135680