Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conus_20tribblei_20[genbank_20GCA_5F001262575.1_202015-08-04] 1,126,156 sequences; 2,160,493,082 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1109944 122 1e-22 seq31215 82.4 1e-10 >seq1109944 Length=1004 Score = 122 bits (134), Expect = 1e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 36542 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 36601 ||||||||||| ||||| || |||||||| ||||| || |||| ||||| ||| ||| Sbjct 492 AAATTTTCATTGACTATGCCATCACTGGCAGCAAAGAATGCCAGCACATGAGATATGAAA 433 Query 36602 TATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 36661 | || || | | | | ||| | ||| | | | || || || | |||||| || Sbjct 432 TGCTTCTCCTCAGATTTCAGTGCCTCCCAGTGTATCAAGTCCTTGGAAAGATCCACCTCC 373 Query 36662 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGA 36721 ||| ||||||| ||||||||||| || || || ||||| ||||| |||||||| |||| | Sbjct 372 TCCGCTGTCCAGAATGATGCCTCCGCTTTCTTGTACATTTTCCAAATGTCATGGTATTCA 313 Query 36722 ATTGGAAAAATAACAAA 36738 || ||||| | ||||| Sbjct 312 ATAGGAAATACCACAAA 296 >seq31215 Length=2442 Score = 82.4 bits (90), Expect = 1e-10 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 65981 TTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 66040 ||| ||||| || ||||| || | || || |||||||||||||| || |||||||| | Sbjct 1679 TTCAAACTCCTCGCCCCACACTTCGTGCAGTCCAGGACATTCATTGGGGCACATCAAGGT 1738 Query 66041 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 66088 ||| ||||||| |||| ||| | ||||| || || || || ||||| Sbjct 1739 CCAGTCTCCGTTCTCCTCCACCCTCTTCATGAACAGGTCTGGGATCCA 1786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 648907734403040